CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

myog.S *(Xenopus laevis)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00010 (HLH)	IPR001092	XB-GENE-865934	T051899_2.00	Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYOG M04098_2.00	Homo sapiens	BRACAGCTGWCR	YGWCAGCTGTYV	SELEX Yin et al.(2017) MYOG_eDBD_HT-SELEX_1	0.914	0.981
MYOG M04099_2.00	Homo sapiens	NAACAGCTGTYN	NRACAGCTGTTN	SELEX Yin et al.(2017) MYOG_eDBD_HT-SELEX_2	0.914	0.981
MYOG M04102_2.00	Homo sapiens	NRACARCTGWCR	YGWCAGYTGTYN	SELEX Yin et al.(2017) MYOG_FL_HT-SELEX_1	0.914	0.981
MYOG M04103_2.00	Homo sapiens	NAACARYTGTYN	NRACARYTGTTN	SELEX Yin et al.(2017) MYOG_FL_HT-SELEX_2	0.914	0.981
Myog M08061_2.00	Mus musculus	RRCAGCTGVNN	NNBCAGCTGYY	ChIP-seq Mathelier et al.(2014) MA0500.1	0.914	0.981
MYOG M08721_2.00	Homo sapiens	BHVCAGCTGYYNB	VNRRCAGCTGBDV	Misc Kulakovskiy et al.(2013) MYOG_HUMAN.H11MO.0.B	0.914	0.981
Myog M08755_2.00	Mus musculus	BHVCAGCTGYYNB	VNRRCAGCTGBDV	Misc Kulakovskiy et al.(2013) MYOG_MOUSE.H11MO.0.A	0.914	0.981
Myog M09469_2.00	Mus musculus	RACAGCTG	CAGCTGTY	Misc Heinz et al.(2010) C2C12-MyoG_GSE36024	0.914	0.981
MYOG M09829_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MYOGENIN_Q6_01	0.914	0.981
MYOG M09830_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MYOGENIN_Q6	0.914	0.981
MYOG M04100_2.00	Homo sapiens	BRACAGCTGTCR	YGACAGCTGTYV	SELEX Yin et al.(2017) MYOG_eDBD_Methyl-HT-SELEX_1	0.914	0.981
MYOG M04101_2.00	Homo sapiens	BAACAGCTGTYV	BRACAGCTGTTV	SELEX Yin et al.(2017) MYOG_eDBD_Methyl-HT-SELEX_2	0.914	0.981
MYOG M04104_2.00	Homo sapiens	BRACAGCTGTCR	YGACAGCTGTYV	SELEX Yin et al.(2017) MYOG_FL_Methyl-HT-SELEX_1	0.914	0.981
MYOG M04105_2.00	Homo sapiens	NAACAGCTGTYN	NRACAGCTGTTN	SELEX Yin et al.(2017) MYOG_FL_Methyl-HT-SELEX_2	0.914	0.981
Myf6 M00120_2.00	Mus musculus	NCRNNTGNY	RNCANNYGN	PBM Badis et al.(2009) Myf6_3824	0.883	0.885
Myf6 M01742_2.00	Mus musculus	RACAGHTGH	DCADCTGTY	PBM Weirauch et al.(2014) pTH5099	0.883	0.885
MYF6 M02780_2.00	Homo sapiens	AACARCTGTY	RACAGYTGTT	SELEX Jolma et al.(2013) MYF6_1	0.883	0.885
MYF6 M04084_2.00	Homo sapiens	BRHCASSTGWCR	YGWCASSTGDYV	SELEX Yin et al.(2017) MYF6_eDBD_HT-SELEX_1	0.883	0.885
MYF6 M04085_2.00	Homo sapiens	NRACASSTGWYV	BRWCASSTGTYN	SELEX Yin et al.(2017) MYF6_eDBD_HT-SELEX_2	0.883	0.885
MYF6 M05831_2.00	Homo sapiens	BRACAKNTGNY	RNCANMTGTYV	SMiLE-seq Isakova et al.(2017) MYF6	0.883	0.885
MYF6 M08717_2.00	Homo sapiens	CASCTGC	GCAGSTG	Misc Kulakovskiy et al.(2013) MYF6_HUMAN.H11MO.0.C	0.883	0.885
Myf6 M08767_2.00	Mus musculus	CASCTGC	GCAGSTG	Misc Kulakovskiy et al.(2013) MYF6_MOUSE.H11MO.0.C	0.883	0.885
MYF6 M09820_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MRF4_Q3	0.883	0.885
MYF6 M04086_2.00	Homo sapiens	BRHCASSTGWCR	YGWCASSTGDYV	SELEX Yin et al.(2017) MYF6_eDBD_Methyl-HT-SELEX_1	0.883	0.885
MYF6 M04087_2.00	Homo sapiens	BAACASSTGWYV	BRWCASSTGTTV	SELEX Yin et al.(2017) MYF6_eDBD_Methyl-HT-SELEX_2	0.883	0.885
Myf5 M09463_2.00	Mus musculus	NRRCAGCTGY	RCAGCTGYYN	Misc Heinz et al.(2010) GM-Myf5_GSE24852	0.842	0.808
MYF5 M09821_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MYF5_Q6	0.842	0.808
MYOD1 M04116_2.00	Homo sapiens	BAACASSTGNYV	BRNCASSTGTTV	SELEX Yin et al.(2017) MYOD1_eDBD_HT-SELEX_1	0.839	0.808
MYOD1 M04117_2.00	Homo sapiens	BRVCASMTGDCG	CGHCAKSTGBYV	SELEX Yin et al.(2017) MYOD1_eDBD_HT-SELEX_2	0.839	0.808
MYOD1 M04120_2.00	Homo sapiens	NAACASSTGNYV	BRNCASSTGTTN	SELEX Yin et al.(2017) MYOD1_FL_HT-SELEX_1	0.839	0.808
MYOD1 M04121_2.00	Homo sapiens	BRMCASCTGDCR	YGHCAGSTGKYV	SELEX Yin et al.(2017) MYOD1_FL_HT-SELEX_2	0.839	0.808
Myod1 M08060_2.00	Mus musculus	NVNRRCAGSTGBN	NVCASCTGYYNBN	ChIP-seq Mathelier et al.(2014) MA0499.1	0.839	0.808
MYOD1 M08724_2.00	Homo sapiens	NVNNRNRRCAGCTGN	NCAGCTGYYNYNNBN	Misc Kulakovskiy et al.(2013) MYOD1_HUMAN.H11MO.0.A	0.839	0.808
Myod1 M08745_2.00	Mus musculus	NVNRRNRRCAGSTGB	VCASCTGYYNYYNBN	Misc Kulakovskiy et al.(2013) MYOD1_MOUSE.H11MO.0.A	0.839	0.808
MYOD1 M09838_2.00	Homo sapiens	HRVCACCTGHBB	VVDCAGGTGBYD	Transfac Matys et al.(2006) V$MYOD_01	0.839	0.808
MYOD1 M09839_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MYOD_Q6_02	0.839	0.808
MYOD1 M09840_2.00	Homo sapiens	NVCABCTGNY	RNCAGVTGBN	Transfac Matys et al.(2006) V$MYOD_Q6	0.839	0.808
MYOD1 M04118_2.00	Homo sapiens	BAACANVTGTYV	BRACABNTGTTV	SELEX Yin et al.(2017) MYOD1_eDBD_Methyl-HT-SELEX_1	0.839	0.808
MYOD1 M04119_2.00	Homo sapiens	BRRCASSTGDCR	YGHCASSTGYYV	SELEX Yin et al.(2017) MYOD1_eDBD_Methyl-HT-SELEX_2	0.839	0.808
MYOD1 M04122_2.00	Homo sapiens	NAMCASSTGBYV	BRVCASSTGKTN	SELEX Yin et al.(2017) MYOD1_FL_Methyl-HT-SELEX_1	0.839	0.808
MYOD1 M04123_2.00	Homo sapiens	BRMCASVTGNCR	YGNCABSTGKYV	SELEX Yin et al.(2017) MYOD1_FL_Methyl-HT-SELEX_2	0.839	0.808
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AAI69565	bHLH	93	144	RRKAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQ
AAL05071	bHLH	93	144	RRKAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRSAIQYIERLQ

Links
Other bHLH family TFs
Other *Xenopus laevis* TFs

274 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

myog.S (Xenopus laevis) bHLH

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

274 Related TFs

myog.S **(Xenopus laevis)
bHLH**