CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_110029
(
Cryphonectria parasitica
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_fgenesh1_kg.C_110029
T052078_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sah-2
M01115_2.00
Neurospora crassa
NHYDNNNNHN
NDNNNNHRDN
PBM
Lambert et al.(2019)
pTH9680
0.871
0.945
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_110029
bHLH
257
347
KKTAHNMIEKRYRTNLNDKIAALRDSVPALRVMVHRLEHADNTNDGTDVMDEIKAEAGLDGDEDLGGVTPAHKLNKATILSKATEYIAHLE
Links
Other
bHLH
family TFs
Other
Cryphonectria parasitica
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_15026
Aegilops tauschii
F775_15026
N
F775_15149
Aegilops tauschii
F775_15149
N
MLOC_51469
Hordeum vulgare
MLOC_51469
N
MLOC_53626
Hordeum vulgare
MLOC_53626
N
MLOC_53627
Hordeum vulgare
MLOC_53627
N
OGLUM05G09300
Oryza glumaepatula
OGLUM05G09300
N
OLONG_021317
Oryza longistaminata
OLONG_021317
N
ONIVA04G07260
Oryza nivara
ONIVA04G07260
N
ORGLA07G0107400
Oryza glaberrima
ORGLA07G0107400
N
ORUFI07G12800
Oryza rufipogon
ORUFI07G12800
N
OS07G0443500
Oryza sativa
OS07G0443500
N
Traes_1BL_5E492444E
Triticum aestivum
Traes_1BL_5E492444E
N
Traes_1BL_B30884E0E
Triticum aestivum
Traes_1BL_B30884E0E
N
Traes_1DL_10172C13A
Triticum aestivum
Traes_1DL_10172C13A
N
Traes_5DL_3FC31F9ED
Triticum aestivum
Traes_5DL_3FC31F9ED
N
TRIUR3_05647
Triticum urartu
TRIUR3_05647
N