CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0000232401
(
Protopolystoma xenopodis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
PXEA_0000232401
T054746_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
twi
M03605_2.00
Drosophila melanogaster
MACACRTGKB
VMCAYGTGTK
SELEX
Nitta et al.(2015)
twi_1
0.862
0.848
twi
M03606_2.00
Drosophila melanogaster
MNDCMYRHCGVD
HBCGDYRKGHNK
SELEX
Nitta et al.(2015)
twi_2
0.862
0.848
twi
M05955_2.00
Drosophila melanogaster
VCCAGATGTB
VACATCTGGB
B1H
Zhu et al.(2011)
twi_da_SANGER_5_FBgn0003900
0.862
0.848
twi
M05956_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
B1H
Zhu et al.(2011)
twi_FlyReg_FBgn0003900
0.862
0.848
twi
M07538_2.00
Drosophila melanogaster
NAACAYRTGSNV
BNSCAYRTGTTN
DNaseI footprinting
Mathelier et al.(2014)
MA0249.1
0.862
0.848
twi
M09657_2.00
Drosophila melanogaster
AACAKVTGBBVD
HBVVCABMTGTT
Misc
Kulakovskiy et al.(2009)
twi
0.862
0.848
twi
M09892_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TWI_Q6
0.862
0.848
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0000232401-mRNA-1
bHLH
135
180
QRFLANVRERQRTQSLNRAFAELRRIIPTLPSDKLSKIQTLKLATR
Links
Other
bHLH
family TFs
Other
Protopolystoma xenopodis
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_02377
Capronia coronata
A1O1_02377
N
A1O5_07132
Cladophialophora psammophila
A1O5_07132
N
A1O7_04910
Cladophialophora yegresii
A1O7_04910
N
A1O9_12373
Exophiala aquamarina
A1O9_12373
N
ACLA_001220
Aspergillus clavatus
CADACLAG00000242
N
ARB_06811
Arthroderma benhamiae
ARB_06811
N
BGHDH14_bgh05226
Blumeria graminis
BGHDH14_bgh05226
N
CFIO01_13419
Colletotrichum fioriniae
CFIO01_13419
N
CH063_02927
Colletotrichum higginsianum
CH063_02927
N
CIMG_06601
Coccidioides immitis
CIMG_06601
N
CPC735_030630
Coccidioides posadasii
CPC735_030630
N
CTHT_0024920
Chaetomium thermophilum
CTHT_0024920
N
EPUS_03856
Endocarpon pusillum
EPUS_03856
N
EV44_g1293
Erysiphe necator
EV44_g1293
N
G647_03750
Cladophialophora carrionii
G647_03750
N
gw1.6.206.1
Nectria haematococca
gw1.6.206.1
N
H102_01311
Trichophyton rubrum
H102_01311
N
H105_01327
Trichophyton soudanense
H105_01327
N
HCBG_06549
Histoplasma capsulatum
HCBG_06549
N
HMPREF1120_02332
Exophiala dermatitidis
HMPREF1120_02332
N
M7I_6904
Glarea lozoyensis
M7I_6904
N
MAC_06055
Metarhizium acridum
MAC_06055
N
MAJ_09186
Metarhizium majus
MAJ_09186
N
MAM_06483
Metarhizium album
MAM_06483
N
MANI_009173
Metarhizium anisopliae
MANI_009173
N
MBR_00701
Metarhizium brunneum
MBR_00701
N
MCYG_01797
Arthroderma otae
MCYG_01797
N
MCYG_01797
Microsporum canis
MCYG_01797
N
MGG_05959
Magnaporthe oryzae
MGG_05959
N
MGU_00835
Metarhizium guizhouense
MGU_00835
N
MGYG_04271
Microsporum gypseum
MGYG_04271
N
NechaG2073
Fusarium solani
NechaG2073
N
OCS_04198
Ophiocordyceps sinensis
OCS_04198
N
OIDMADRAFT_62029
Oidiodendron maius
OIDMADRAFT_62029
N
PAAG_04257
Paracoccidioides sp lutzii
PAAG_04257
N
PABG_04038
Paracoccidioides brasiliensis
PABG_04038
N
Pc22g13920
Penicillium chrysogenum
Pc22g13920
N
PCH_Pc22g13920
Penicillium rubens
PCH_Pc22g13920
N
PDIP_53700
Penicillium digitatum
PDIP_53700
N
PEX1_088910
Penicillium expansum
PEX1_088910
N
PITC_015930
Penicillium italicum
PITC_015930
N
PMAA_083210
Penicillium marneffei
PMAA_083210
N
PMAA_083210
Talaromyces marneffei
PMAA_083210
N
PV04_04302
Capronia semiimmersa
PV04_04302
N
PV05_06244
Exophiala xenobiotica
PV05_06244
N
PV06_01730
Exophiala oligosperma
PV06_01730
N
PV07_05162
Cladophialophora immunda
PV07_05162
N
PV10_06622
Exophiala mesophila
PV10_06622
N
PVAR5_6035
Byssochlamys spectabilis
PVAR5_6035
N
TEQG_03505
Trichophyton equinum
TEQG_03505
N
TESG_00611
Trichophyton tonsurans
TESG_00611
N
TRV_06765
Trichophyton verrucosum
TRV_06765
N
U727_00430291271
Penicillium solitum
U727_00430291271
N
UREG_03844
Uncinocarpus reesii
UREG_03844
N
X797_009049
Metarhizium robertsii
X797_009049
N
YALI0_E11693g
Yarrowia lipolytica
YALI0_E11693g
N
Z517_06288
Fonsecaea pedrosoi
Z517_06288
N
Z518_00296
Rhinocladiella mackenziei
Z518_00296
N
Z519_06369
Cladophialophora bantiana
Z519_06369
N