SMTD_0000012501 (Schistosoma mattheei)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMTD_0000012501 T054905_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.857 0.852
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.857 0.852
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.857 0.852
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.857 0.852
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.857 0.852
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.857 0.852
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.857 0.852
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.857 0.833
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.857 0.833
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.857 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMTD_0000012501-mRNA-1 bHLH 29 82

Links

Other bHLH family TFs
Other Schistosoma mattheei TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.3.911.1 Heterobasidion annosum gw1.3.911.1 N 0.000
HETIRDRAFT_18758 Heterobasidion irregulare HETIRDRAFT_18758 N 0.000
K437DRAFT_223075 Tilletiaria anomala K437DRAFT_223075 N 0.000
PaG_02114 Pseudozyma aphidis PaG_02114 N 0.000
PFL1_06106 Pseudozyma flocculosa PFL1_06106 N 0.000
PHACADRAFT_73403 Phanerochaete carnosa PHACADRAFT_73403 N 0.000
PHLGIDRAFT_64854 Phlebiopsis gigantea PHLGIDRAFT_64854 N 0.000
sr11829 Sporisorium reilianum sr11829 N 0.000
UHOR_00851 Ustilago hordei UHOR_00851 N 0.000
UM00551 Ustilago maydis UM00551 N 0.000