CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
(
Meloidogyne floridensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
T054955_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1-mRNA-1
bHLH
26
76
NLAAHNELEKNRRANLRGHLEALKSVLPPESDTHRDTTLSLLTRARNYIKM
Links
Other
bHLH
family TFs
Other
Meloidogyne floridensis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA000302
Oryza indica
BGIOSGA000302
N
LPERR01G35570
Leersia perrieri
LPERR01G35570
N
OB01G49710
Oryza brachyantha
OB01G49710
N
OBART01G40980
Oryza barthii
OBART01G40980
N
OLONG_004138
Oryza longistaminata
OLONG_004138
N
OMERI01G37990
Oryza meridionalis
OMERI01G37990
N
ONIVA01G46020
Oryza nivara
ONIVA01G46020
N
OPUNC01G39820
Oryza punctata
OPUNC01G39820
N
ORGLA01G0349100
Oryza glaberrima
ORGLA01G0349100
N
ORUFI01G44300
Oryza rufipogon
ORUFI01G44300
N
OS01G0905400
Oryza sativa
OS01G0905400
N
Pavir.Ea03523
Panicum virgatum
Pavir.Ea03523
N
Sb03g043110
Sorghum bicolor
Sb03g043110
N
Si004140m.g
Setaria italica
Si004140m.g
N