ENSPSIG00000001402 (Pelodiscus sinensis)
Brinker

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09607 (BrkDBD) IPR018586 ENSPSIG00000001402 T055604_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSXETG00000008236_CONSTRUCT
M01131_2.00 		PBM CONSTRUCTS
WWAGCCGA
TCGGCTWW		 PBM
Lambert et al.(2019)
pTH9755 		0.939 0.939
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000001397 Brinker 15 63

Links

Other Brinker family TFs
Other Pelodiscus sinensis TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_16836 Phytophthora parasitica F443_16836 N
fgenesh1_pm.C_scaffold_9000158 Phytophthora capsici fgenesh1_pm.C_scaffold_9000158 N
fgenesh_masked-par_contig_1782-abinit-gene-0.6 Pythium arrhenomanes fgenesh_masked-par_contig_1782-abinit-gene-0.6 N
fgenesh_scip_prom.28083.2088 Phytophthora lateralis fgenesh_scip_prom.28083.2088 N
HpaG808622 Hyaloperonospora arabidopsidis HpaG808622 N
maker-pir_contig_1091-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1091-fgenesh-gene-0.2 N
maker-pir_contig_2120-snap-gene-0.3 Pythium irregulare maker-pir_contig_2120-snap-gene-0.3 N
maker-pir_contig_834-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_834-fgenesh-gene-0.2 N
maker-piw_contig_643-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_643-fgenesh-gene-0.2 N
maker-piw_contig_643-fgenesh-gene-0.6 Pythium iwayamai maker-piw_contig_643-fgenesh-gene-0.6 N
Phyra84533 Phytophthora ramorum Phyra84533 N
PITG_21561 Phytophthora infestans PITG_21561 N
PYU1_G006427 Pythium ultimum PYU1_G006427 N
PYU1_G006442 Pythium ultimum PYU1_G006442 N
PYU1_G006443 Pythium ultimum PYU1_G006443 N
PYU1_G009000 Pythium ultimum PYU1_G009000 N