CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG07594
(
Caenorhabditis briggsae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
CBG07594
T057934_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
atf-5
M00593_2.00
Caenorhabditis elegans
NKVTGACGTNN
NNACGTCABMN
PBM
Narasimhan et al.(2015)
pTH9911
0.914
0.922
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG07594
bZIP
162
225
KTPEKKERKKAQNRLAATRYREKKRREKEEALTCIEGLTVTNLKLKDQVSELEREVRYFKKFMQ
Links
Other
bZIP
family TFs
Other
Caenorhabditis briggsae
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
atf-5
Caenorhabditis elegans
WBGene00000221
D
0.914
CBN25613
Caenorhabditis brenneri
CBN25613
I
0.899
CRE15399
Caenorhabditis remanei
CRE15399
I
0.914