CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG13248
(
Caenorhabditis briggsae
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
CBG13248
T057942_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.846
0.750
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.846
0.750
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.836
0.719
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.836
0.719
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.836
0.719
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.836
0.719
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.836
0.719
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.831
0.766
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.831
0.766
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.831
0.766
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.831
0.766
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.831
0.766
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.831
0.766
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.831
0.766
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.831
0.766
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.831
0.766
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.831
0.766
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.831
0.766
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.831
0.766
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.831
0.766
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.831
0.766
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.831
0.766
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.831
0.766
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.831
0.766
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.831
0.766
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.831
0.766
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.831
0.766
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.831
0.766
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.831
0.766
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.831
0.766
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.831
0.766
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.831
0.750
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.831
0.750
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.825
0.703
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.825
0.703
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.825
0.703
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.820
0.672
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.820
0.672
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.820
0.672
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.820
0.672
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.820
0.672
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG13248
bZIP
344
407
ESNRKRQVRLLKNREAAKECRRKKKEYVKCLENRVSVLENQNKALIEELKTLKELYCRKEKDQM
Links
Other
bZIP
family TFs
Other
Caenorhabditis briggsae
TFs
358 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_02846
Cladophialophora psammophila
A1O5_02846
I
A1O7_06866
Cladophialophora yegresii
A1O7_06866
I
A1O9_01300
Exophiala aquamarina
A1O9_01300
I
AB08968.1
Alternaria brassicicola
AB08968.1
I
ACRE_056860
Acremonium chrysogenum
ACRE_056860
I
AFUA_2G02540
Aspergillus fumigatus
CADAFUAG00003598
I
ANIA_04562
Aspergillus nidulans
CADANIAG00005876
D
AOL_s00079g257
Arthrobotrys oligospora
AOL_s00079g257
I
ARB_03451
Arthroderma benhamiae
ARB_03451
I
ATEG_06925
Aspergillus terreus
CADATEAG00003197
I
BBA_06721
Beauveria bassiana
BBA_06721
I
Bcin06g02160
Botrytis cinerea
Bcin06g02160
I
BDDG_07931
Blastomyces dermatitidis
BDDG_07931
I
CADAFLAG00007235
Aspergillus flavus
CADAFLAG00007235
I
CADANGAG00005877
Aspergillus niger
CADANGAG00005877
I
CaO19.10704
Candida albicans
CaO19.10704
I
CaO19.3193
Candida albicans
CaO19.3193
I
CCM_03249
Cordyceps militaris
CCM_03249
I
CD36_51520
Candida dubliniensis
CD36_51520
I
CFIO01_10839
Colletotrichum fioriniae
CFIO01_10839
I
CGGC5_11283
Colletotrichum gloeosporioides
CGGC5_11283
I
CH063_04138
Colletotrichum higginsianum
CH063_04138
I
CHGG_06554
Chaetomium globosum
CHGG_06554
I
CIMG_01816
Coccidioides immitis
CIMG_01816
I
CMQ_4918
Grosmannia clavigera
CMQ_4918
I
Cob_04988
Colletotrichum orbiculare
Cob_04988
I
COCC4DRAFT_125759
Bipolaris maydis
COCC4DRAFT_125759
I
COCCADRAFT_29461
Bipolaris zeicola
COCCADRAFT_29461
I
COCMIDRAFT_108054
Bipolaris oryzae
COCMIDRAFT_108054
I
COCSADRAFT_86485
Bipolaris sorokiniana
COCSADRAFT_86485
I
COCVIDRAFT_20419
Bipolaris victoriae
COCVIDRAFT_20419
I
COCVIDRAFT_30018
Bipolaris victoriae
COCVIDRAFT_30018
I
CPC735_046790
Coccidioides posadasii
CPC735_046790
I
CSUB01_03547
Colletotrichum sublineola
CSUB01_03547
I
CTHT_0012120
Chaetomium thermophilum
CTHT_0012120
I
EPUS_07397
Endocarpon pusillum
EPUS_07397
I
estExt_fgenesh3_kg.C_20222
Neurospora discreta
estExt_fgenesh3_kg.C_20222
I
estExt_fgeneshPB_pg.C_10616
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_10616
I
estExt_Genewise1Plus.C_40021
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_40021
I
estExt_Genewise1Plus.C_sca_2_chr3_3_01039
Nectria haematococca
estExt_Genewise1Plus.C_sca_2_chr3_3_01039
I
e_gw1.00771.352.1
Aspergillus carbonarius
e_gw1.00771.352.1
I
F503_06201
Ophiostoma piceae uamh
F503_06201
I
FFUJ_06219
Fusarium fujikuroi
FFUJ_06219
I
FGRRES_13313_M
Fusarium graminearum
FGRRES_13313_M
I
FPSE_11731
Fusarium pseudograminearum
FPSE_11731
I
FVEG_01956
Fusarium verticillioides
FVEG_01956
I
G647_03229
Cladophialophora carrionii
G647_03229
I
GGTG_04663
Gaeumannomyces graminis
GGTG_04663
I
GLOINDRAFT_120758
Rhizophagus irregularis
GLOINDRAFT_120758
I
GLRG_02502
Colletotrichum graminicola
GLRG_02502
I
GMDG_07872
Pseudogymnoascus destructans
GMDG_07872
I
H072_3382
Dactylellina haptotyla
H072_3382
I
H101_05542
Trichophyton interdigitale
H101_05542
I
H102_08445
Trichophyton rubrum
H102_08445
I
HMPREF1541_10554
Cyphellophora europaea
HMPREF1541_10554
I
HMPREF1624_04787
Sporothrix schenckii
HMPREF1624_04787
I
LEMA_P113690.1
Leptosphaeria maculans
LEMA_P113690.1
I
MAC_00870
Metarhizium acridum
MAC_00870
I
MAJ_03937
Metarhizium majus
MAJ_03937
I
MAM_03270
Metarhizium album
MAM_03270
I
MANI_016891
Metarhizium anisopliae
MANI_016891
I
MAPG_10727
Magnaporthe poae
MAPG_10727
I
MBM_06265
Marssonina brunnea
MBM_06265
I
MBR_08061
Metarhizium brunneum
MBR_08061
I
MCYG_03346
Microsporum canis
MCYG_03346
I
MCYG_03346
Arthroderma otae
MCYG_03346
I
MGG_02632
Magnaporthe oryzae
MGG_02632
I
MGU_03543
Metarhizium guizhouense
MGU_03543
I
MGYG_00508
Microsporum gypseum
MGYG_00508
I
MYCTH_2298160
Myceliophthora thermophila
MYCTH_2298160
I
NCU01994
Neurospora crassa
NCU01994
D
NechaG67451
Fusarium solani
NechaG67451
I
NEUTE1DRAFT_89466
Neurospora tetrasperma
NEUTE1DRAFT_89466
I
OCS_05600
Ophiocordyceps sinensis
OCS_05600
I
OIDMADRAFT_110220
Oidiodendron maius
OIDMADRAFT_110220
I
PAAG_05122
Paracoccidioides sp lutzii
PAAG_05122
I
PABG_04569
Paracoccidioides brasiliensis
PABG_04569
I
Pc12g16510
Penicillium chrysogenum
Pc12g16510
I
Pc18g00030
Penicillium chrysogenum
Pc18g00030
I
PCH_Pc12g16510
Penicillium rubens
PCH_Pc12g16510
I
PCH_Pc18g00030
Penicillium rubens
PCH_Pc18g00030
I
PDE_05394
Penicillium oxalicum
PDE_05394
I
PDIP_75650
Penicillium digitatum
PDIP_75650
I
PEX1_067480
Penicillium expansum
PEX1_067480
I
PFICI_02800
Pestalotiopsis fici
PFICI_02800
I
PITC_036100
Penicillium italicum
PITC_036100
I
PMAA_045020
Talaromyces marneffei
PMAA_045020
I
PMAA_045020
Penicillium marneffei
PMAA_045020
I
PTRG_07150
Pyrenophora triticirepentis
PTRG_07150
I
PTT_08596
Pyrenophora teres
PTT_08596
I
PV04_07297
Capronia semiimmersa
PV04_07297
I
PV05_09803
Exophiala xenobiotica
PV05_09803
I
PV06_05518
Exophiala oligosperma
PV06_05518
I
PV07_10932
Cladophialophora immunda
PV07_10932
I
PV08_01459
Exophiala spinifera
PV08_01459
I
PV09_01442
Verruconis gallopava
PV09_01442
I
PV10_06310
Exophiala mesophila
PV10_06310
I
PV11_09617
Exophiala sideris
PV11_09617
I
PVAR5_0698
Byssochlamys spectabilis
PVAR5_0698
I
S40285_07743
Stachybotrys chlorohalonata
S40285_07743
I
S40288_03446
Stachybotrys chartarum
S40288_03446
I
SAPIO_CDS6640
Scedosporium apiospermum
SAPIO_CDS6640
I
SBOR_5107
Sclerotinia borealis
SBOR_5107
I
SETTUDRAFT_111603
Setosphaeria turcica
SETTUDRAFT_111603
I
SMAC_05437
Sordaria macrospora
SMAC_05437
I
SNOG_00166
Stagonospora nodorum
SNOG_00166
I
SNOG_00166
Phaeosphaeria nodorum
SNOG_00166
I
SS1G_02552
Sclerotinia sclerotiorum
SS1G_02552
I
TEQG_00858
Trichophyton equinum
TEQG_00858
I
TESG_06189
Trichophyton tonsurans
TESG_06189
I
THITE_2111586
Thielavia terrestris
THITE_2111586
I
TRIATDRAFT_300980
Trichoderma atroviride
TRIATDRAFT_300980
I
TRIREDRAFT_74576
Trichoderma reesei
TRIREDRAFT_74576
I
TRIVIDRAFT_150786
Trichoderma virens
TRIVIDRAFT_150786
I
TRV_06106
Trichophyton verrucosum
TRV_06106
I
TSTA_034220
Talaromyces stipitatus
TSTA_034220
I
U727_00433932361
Penicillium solitum
U727_00433932361
I
UCREL1_7025
Eutypa lata
UCREL1_7025
I
UCRNP2_115
Neofusicoccum parvum
UCRNP2_115
I
UCRPA7_5501
Togninia minima
UCRPA7_5501
I
UREG_05510
Uncinocarpus reesii
UREG_05510
I
UV8b_1784
Ustilaginoidea virens
UV8b_1784
I
V499_08520
Pseudogymnoascus pannorum
V499_08520
I
VHEMI07796
Torrubiella hemipterigena
VHEMI07796
I
X797_006365
Metarhizium robertsii
X797_006365
I
Z517_09948
Fonsecaea pedrosoi
Z517_09948
I
Z518_09068
Rhinocladiella mackenziei
Z518_09068
I
Z519_07376
Cladophialophora bantiana
Z519_07376
I