CGI_10008414 (Crassostrea gigas)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 CGI_10008414 T058119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pdp1
M03645_2.00 		Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB		 SELEX
Nitta et al.(2015)
Pdp1_1 		0.809 0.672
Pdp1
M03646_2.00 		Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY		 SELEX
Nitta et al.(2015)
Pdp1_2 		0.809 0.672
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.803 0.609
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.803 0.609
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.803 0.609
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.803 0.609
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.803 0.609
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.803 0.609
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.803 0.609
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.803 0.609
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.803 0.609
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.782 0.594
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.782 0.594
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.782 0.594
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.782 0.594
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.782 0.594
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.782 0.594
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.782 0.594
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.782 0.594
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC33440 bZIP 188 254

Links

Other bZIP family TFs
Other Crassostrea gigas TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGGC5_7571 Colletotrichum gloeosporioides CGGC5_7571 N 0.000
estExt_Genewise1Plus.C_140036 Cryphonectria parasitica estExt_Genewise1Plus.C_140036 N 0.000
FFUJ_08424 Fusarium fujikuroi FFUJ_08424 N 0.000
fgenesh1_pg.sca_12_chr5_2_0000282 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000282 N 0.000
fgenesh1_pg.sca_12_chr5_2_0000331 Nectria haematococca fgenesh1_pg.sca_12_chr5_2_0000331 N 0.000
FGRRES_05725 Fusarium graminearum FGRRES_05725 N 0.000
FOXG_08746 Fusarium oxysporum FOXG_08746 N 0.000
FPSE_08824 Fusarium pseudograminearum FPSE_08824 N 0.000
G647_05188 Cladophialophora carrionii G647_05188 N 0.000
GGTG_09020 Gaeumannomyces graminis GGTG_09020 N 0.000
NechaG80102 Fusarium solani NechaG80102 N 0.000
NechaG80151 Fusarium solani NechaG80151 N 0.000
NFIA_072260 Neosartorya fischeri CADNFIAG00006741 N 0.000
Pc13g06530 Penicillium chrysogenum Pc13g06530 N 0.000
PCH_Pc13g06530 Penicillium rubens PCH_Pc13g06530 N 0.000
PEX1_099950 Penicillium expansum PEX1_099950 N 0.000
PITC_065540 Penicillium italicum PITC_065540 N 0.000
PV06_06827 Exophiala oligosperma PV06_06827 N 0.000
PV08_07701 Exophiala spinifera PV08_07701 N 0.000
PV09_04169 Verruconis gallopava PV09_04169 N 0.000
PV11_05636 Exophiala sideris PV11_05636 N 0.000
SS1G_02054 Sclerotinia sclerotiorum SS1G_02054 N 0.000
TRIVIDRAFT_189391 Trichoderma virens TRIVIDRAFT_189391 N 0.000
U727_00430311331 Penicillium solitum U727_00430311331 N 0.000
V499_04467 Pseudogymnoascus pannorum V499_04467 N 0.000
V499_06431 Pseudogymnoascus pannorum V499_06431 N 0.000
VHEMI09976 Torrubiella hemipterigena VHEMI09976 N 0.000
X797_011070 Metarhizium robertsii X797_011070 N 0.000