CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ATF6
(
Ornithorhynchus anatinus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSOANG00000009735
T060578_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.853
0.844
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.853
0.844
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.853
0.844
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK
MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.853
0.844
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.853
0.844
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY
RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.853
0.844
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.853
0.844
ATF6
M09947_2.00
Homo sapiens
TGACGTGG
CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.853
0.844
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.853
0.844
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.853
0.844
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.800
0.625
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.800
0.625
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.800
0.625
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.800
0.625
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.800
0.625
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC
GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.800
0.625
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT
ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.800
0.625
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.800
0.625
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.800
0.625
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000015446
bZIP
161
228
ATVLRRQQRMIKNRESACQSRKKKKDYMLGLEARLKAALSENDKLKRENGFLRHQLDQVVSENQKLKV
Links
Other
bZIP
family TFs
Other
Ornithorhynchus anatinus
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R009770
Calypte anna
Aan_R009770
N
0.000
Afo_R014912
Aptenodytes forsteri
Afo_R014912
N
0.000
Alligator_sinensis_CCG001918.1
Alligator sinensis
Alligator_sinensis_CCG001918.1
N
0.000
Brh_R013449
Buceros rhinoceros
Brh_R013449
N
0.000
ENSAMEG00000015958
Ailuropoda melanoleuca
ENSAMEG00000015958
N
0.000
ENSAMXG00000004338
Astyanax mexicanus
ENSAMXG00000004338
N
0.000
ENSAPLG00000007996
Anas platyrhynchos
ENSAPLG00000007996
N
0.000
ENSCAFG00000000207
Canis familiaris
ENSCAFG00000000207
N
0.000
ENSCAFG00000029259
Canis familiaris
ENSCAFG00000029259
N
0.000
ENSCSAG00000016709
Chlorocebus sabaeus
ENSCSAG00000016709
N
0.000
ENSFALG00000011864
Ficedula albicollis
ENSFALG00000011864
N
0.000
ENSGMOG00000019484
Gadus morhua
ENSGMOG00000019484
N
0.000
ENSLACG00000000361
Latimeria chalumnae
ENSLACG00000000361
N
0.000
ENSLOCG00000016230
Lepisosteus oculatus
ENSLOCG00000016230
N
0.000
ENSMEUG00000006043
Macropus eugenii
ENSMEUG00000006043
N
0.000
ENSMPUG00000014801
Mustela putorius furo
ENSMPUG00000014801
N
0.000
ENSNLEG00000014649
Nomascus leucogenys
ENSNLEG00000014649
N
0.000
ENSOARG00000014646
Ovis aries
ENSOARG00000014646
N
0.000
ENSONIG00000000447
Oreochromis niloticus
ENSONIG00000000447
N
0.000
ENSP00000237264
Macaca fascicularis
ENSP00000237264
N
0.000
ENSP00000237264-D1
Bos grunniens
ENSP00000237264-D1
N
0.000
ENSPANG00000020089
Papio anubis
ENSPANG00000020089
N
0.000
ENSPMAG00000002663
Petromyzon marinus
ENSPMAG00000002663
N
0.000
ENSPPYG00000017023
Pongo abelii
ENSPPYG00000017023
N
0.000
ENSPSIG00000003645
Pelodiscus sinensis
ENSPSIG00000003645
N
0.000
ENSSHAG00000005937
Sarcophilus harrisii
ENSSHAG00000005937
N
0.000
ENSSTOG00000006786
Ictidomys tridecemlineatus
ENSSTOG00000006786
N
0.000
ENSTSYG00000005756
Tarsius syrichta
ENSTSYG00000005756
N
0.000
ENSXMAG00000004323
Xiphophorus maculatus
ENSXMAG00000004323
N
0.000
Gfo_R006438
Geospiza fortis
Gfo_R006438
N
0.000
Myotis_brandtii_TBPL1_10035691
Myotis brandtii
Myotis_brandtii_TBPL1_10035691
N
0.000
Pvit_15344
Pogona vitticeps
Pvit_15344
N
0.000
Tal_R007437
Tyto alba
Tal_R007437
N
0.000
TBPL1
Tupaia belangeri
ENSTBEG00000013148
N
0.000
TBPL1
Vicugna pacos
ENSVPAG00000006272
N
0.000
TBPL1
Taeniopygia guttata
ENSTGUG00000011544
N
0.000
TBPL1
Sus scrofa
ENSSSCG00000022387
N
0.000
TBPL1
Tursiops truncatus
ENSTTRG00000009662
N
0.000
TBPL1
Sorex araneus
ENSSARG00000005911
N
0.000
Tbpl1
Rattus norvegicus
ENSRNOG00000011114
N
0.000
TBPL1
Pteropus vampyrus
ENSPVAG00000000468
N
0.000
TBPL1
Pan troglodytes
ENSPTRG00000018624
N
0.000
tbpl1
Xenopus tropicalis
XB-GENE-488460
N
0.000
TBPL1
Oryctolagus cuniculus
ENSOCUG00000007091
N
0.000
tbpl1
Oryzias latipes
ENSORLG00000016505
N
0.000
TBPL1
Bos taurus
ENSBTAG00000035370
N
0.000
TBPL1
Canis familiaris
ENSCAFG00000023223
N
0.000
TBPL1
Choloepus hoffmanni
ENSCHOG00000007544
N
0.000
TBPL1
Callithrix jacchus
ENSCJAG00000002794
N
0.000
TBPL1
Cavia porcellus
ENSCPOG00000011899
N
0.000
tbpl1
Danio rerio
ENSDARG00000036868
N
0.000
TBPL1
Dasypus novemcinctus
ENSDNOG00000048107
N
0.000
TBPL1
Equus caballus
ENSECAG00000019486
N
0.000
TBPL1
Felis catus
ENSFCAG00000022687
N
0.000
TBPL1
Homo sapiens
ENSG00000028839
N
0.000
tbpl1
Gasterosteus aculeatus
ENSGACG00000010959
N
0.000
TBPL1
Gallus gallus
ENSGALG00000013981
N
0.000
TBPL1
Loxodonta africana
ENSLAFG00000014064
N
0.000
TBPL1
Meleagris gallopavo
ENSMGAG00000013114
N
0.000
TBPL1
Microcebus murinus
ENSMICG00000015740
N
0.000
TBPL1
Myotis lucifugus
ENSMLUG00000002050
N
0.000
TBPL1
Monodelphis domestica
ENSMODG00000017515
N
0.000
Tbpl1
Mus musculus
ENSMUSG00000071359
N
0.000
TBPL1
Ornithorhynchus anatinus
ENSOANG00000013097
N
0.000
TBPL1
Anolis carolinensis
ENSACAG00000000340
N
0.000
TBPL1
Otolemur garnettii
ENSOGAG00000006622
N
0.000
TBPL1
Ochotona princeps
ENSOPRG00000017268
N
0.000
TBPL1
Procavia capensis
ENSPCAG00000001342
N
0.000
tbpl1.L
Xenopus laevis
XB-GENE-865785
N
0.000