CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Atf5
(
Rattus norvegicus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSRNOG00000020060
T061321_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF5
M09987_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF5_01
0.928
0.984
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000027260
bZIP
205
267
TRGDRKQKKRDQNKSAALRYRQRKRAEGEALEGECQGLEARNRELRERAESVEREIQYVKDLL
Links
Other
bZIP
family TFs
Other
Rattus norvegicus
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00053p00216880
Amborella trichopoda
AMTR_s00053p00216880
N
0.000
Aquca_013_00218
Aquilegia coerulea
Aquca_013_00218
I
0.000
BGIOSGA004404
Oryza indica
BGIOSGA004404
I
0.000
evm.TU.supercontig_11.70
Carica papaya
evm.TU.supercontig_11.70
I
0.000
GLYMA16G03480
Glycine max
GLYMA16G03480
I
0.000
Gorai.007G103600
Gossypium raimondii
Gorai.007G103600
I
0.000
GRMZM2G111354
Zea mays
GRMZM2G111354
I
0.000
LPERR01G25700
Leersia perrieri
LPERR01G25700
I
0.000
MDP0000756254
Malus domestica
MDP0000756254
N
0.000
OB01G38850
Oryza brachyantha
OB01G38850
I
0.000
OBART01G29960
Oryza barthii
OBART01G29960
I
0.000
OGLUM01G34020
Oryza glumaepatula
OGLUM01G34020
I
0.000
OLONG_016122
Oryza longistaminata
OLONG_016122
I
0.000
OMERI01G27420
Oryza meridionalis
OMERI01G27420
I
0.000
ONIVA01G34250
Oryza nivara
ONIVA01G34250
I
0.000
OPUNC01G29800
Oryza punctata
OPUNC01G29800
I
0.000
OPUNC01G29830
Oryza punctata
OPUNC01G29830
I
0.000
ORGLA01G0245700
Oryza glaberrima
ORGLA01G0245700
I
0.000
ORUFI01G33070
Oryza rufipogon
ORUFI01G33070
I
0.000
OS01G0734000
Oryza sativa
OS01G0734000
I
0.000
Pavir.Ea02960
Panicum virgatum
Pavir.Ea02960
I
0.000
Pavir.Eb03043
Panicum virgatum
Pavir.Eb03043
I
0.000
Pm018766
Prunus mume
Pm018766
I
0.000
PRUPE_ppa024540mg
Prunus persica
PRUPE_ppa024540mg
I
0.000
Sb03g033780
Sorghum bicolor
Sb03g033780
I
0.000
Si002751m.g
Setaria italica
Si002751m.g
I
0.000
Traes_3AL_4769A72F1
Triticum aestivum
Traes_3AL_4769A72F1
N
0.000