ATF3 (Sus scrofa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSSSCG00000015595 T061431_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.929 0.984
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.823 1.000
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.929 0.984
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.823 1.000
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.929 0.984
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.823 1.000
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.881 0.742
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.823 1.000
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.881 0.742
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.881 0.742
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.881 0.742
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.823 1.000
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.881 0.742
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.823 1.000
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.881 0.742
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.823 1.000
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.881 0.742
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.823 1.000
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.881 0.742
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.823 1.000
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.881 0.742
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.823 1.000
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.881 0.742
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.823 1.000
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.881 0.742
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.823 1.000
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.881 0.742
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.823 1.000
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.879 0.742
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.823 1.000
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.879 0.742
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.823 1.000
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.879 0.742
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.823 1.000
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.879 0.742
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.823 1.000
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.879 0.742
Atf3
M03648_2.00 		Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Nitta et al.(2015)
Atf3_1 		0.789 0.565
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000016534 bZIP 84 145
ENSSSCP00000028528 bZIP 55 87
ENSSSCP00000028980 bZIP 27 89

Links

Other bZIP family TFs
Other Sus scrofa TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02688 Capronia coronata A1O1_02688 N
A1O3_05266 Capronia epimyces A1O3_05266 N
A1O5_01442 Cladophialophora psammophila A1O5_01442 N
A1O7_08334 Cladophialophora yegresii A1O7_08334 N
ACLA_016070 Aspergillus clavatus CADACLAG00000861 N
ACRE_022770 Acremonium chrysogenum ACRE_022770 N
AFUA_5G13080 Aspergillus fumigatus CADAFUAG00006036 N
ARB_01700 Arthroderma benhamiae ARB_01700 N
BAUCODRAFT_72261 Baudoinia compniacensis BAUCODRAFT_72261 N
BBA_02591 Beauveria bassiana BBA_02591 N
Bcin03g01100 Botrytis cinerea Bcin03g01100 N
BDDG_02330 Blastomyces dermatitidis BDDG_02330 N
CADAORAG00011561 Aspergillus oryzae CADAORAG00011561 N
CCM_03094 Cordyceps militaris CCM_03094 N
CFIO01_11426 Colletotrichum fioriniae CFIO01_11426 N
CGGC5_6062 Colletotrichum gloeosporioides CGGC5_6062 N
CH063_05999 Colletotrichum higginsianum CH063_05999 N
CHGG_02432 Chaetomium globosum CHGG_02432 N
CIMG_09756 Coccidioides immitis CIMG_09756 N
CMQ_5876 Grosmannia clavigera CMQ_5876 N
Cob_11832 Colletotrichum orbiculare Cob_11832 N
CPC735_023090 Coccidioides posadasii CPC735_023090 N
CPUR_02213 Claviceps purpurea CPUR_02213 N
CSUB01_00157 Colletotrichum sublineola CSUB01_00157 N
CTHT_0029190 Chaetomium thermophilum CTHT_0029190 N
EPUS_05767 Endocarpon pusillum EPUS_05767 N
estExt_Genewise1.C_11835 Neurospora discreta estExt_Genewise1.C_11835 N
EURHEDRAFT_416038 Aspergillus ruber EURHEDRAFT_416038 N
e_gw1.00710.35.1 Aspergillus carbonarius e_gw1.00710.35.1 N
e_gw1.1.3574.1 Cryphonectria parasitica e_gw1.1.3574.1 N
F503_00183 Ophiostoma piceae uamh F503_00183 N
G647_07293 Cladophialophora carrionii G647_07293 N
GGTG_02625 Gaeumannomyces graminis GGTG_02625 N
GLRG_03112 Colletotrichum graminicola GLRG_03112 N
GSTUM_00005836001 Tuber melanosporum GSTUM_00005836001 N
H101_00462 Trichophyton interdigitale H101_00462 N
H102_08872 Trichophyton rubrum H102_08872 N
H105_08898 Trichophyton soudanense H105_08898 N
HMPREF1624_04517 Sporothrix schenckii HMPREF1624_04517 N
M437DRAFT_47906 Aureobasidium melanogenum M437DRAFT_47906 N
MAC_02105 Metarhizium acridum MAC_02105 N
MAJ_05489 Metarhizium majus MAJ_05489 N
MAM_02243 Metarhizium album MAM_02243 N
MANI_002092 Metarhizium anisopliae MANI_002092 N
MBM_07053 Marssonina brunnea MBM_07053 N
MBR_07319 Metarhizium brunneum MBR_07319 N
MGG_07458 Magnaporthe oryzae MGG_07458 N
MGU_05987 Metarhizium guizhouense MGU_05987 N
MPH_00903 Macrophomina phaseolina MPH_00903 N
MYCTH_2301100 Myceliophthora thermophila MYCTH_2301100 N
NCU09529 Neurospora crassa NCU09529 N
NEUTE1DRAFT_75753 Neurospora tetrasperma NEUTE1DRAFT_75753 N
NFIA_073950 Neosartorya fischeri CADNFIAG00007563 N
OCS_02045 Ophiocordyceps sinensis OCS_02045 N
PDE_07378 Penicillium oxalicum PDE_07378 N
PODANS_2_8520 Podospora anserina PODANS_2_8520 N
PV04_08874 Capronia semiimmersa PV04_08874 N
PV06_05084 Exophiala oligosperma PV06_05084 N
PV07_00953 Cladophialophora immunda PV07_00953 N
PV08_09110 Exophiala spinifera PV08_09110 N
PV09_02763 Verruconis gallopava PV09_02763 N
PV11_02440 Exophiala sideris PV11_02440 N
PVAR5_1770 Byssochlamys spectabilis PVAR5_1770 N
S40285_01658 Stachybotrys chlorohalonata S40285_01658 N
S40288_00446 Stachybotrys chartarum S40288_00446 N
SBOR_3507 Sclerotinia borealis SBOR_3507 N
SEPMUDRAFT_17793 Sphaerulina musiva SEPMUDRAFT_17793 N
SPBR_05600 Sporothrix brasiliensis SPBR_05600 N
SS1G_00787 Sclerotinia sclerotiorum SS1G_00787 N
TEQG_08764 Trichophyton equinum TEQG_08764 N
TESG_03160 Trichophyton tonsurans TESG_03160 N
THITE_2107310 Thielavia terrestris THITE_2107310 N
TRIATDRAFT_321925 Trichoderma atroviride TRIATDRAFT_321925 N
TRIREDRAFT_3449 Trichoderma reesei TRIREDRAFT_3449 N
TRIVIDRAFT_229241 Trichoderma virens TRIVIDRAFT_229241 N
TRV_03395 Trichophyton verrucosum TRV_03395 N
UREG_04680 Uncinocarpus reesii UREG_04680 N
VHEMI00945 Torrubiella hemipterigena VHEMI00945 N
X797_006673 Metarhizium robertsii X797_006673 N
Z517_05121 Fonsecaea pedrosoi Z517_05121 N
Z518_05219 Rhinocladiella mackenziei Z518_05219 N
Z519_11826 Cladophialophora bantiana Z519_11826 N