CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000007121
(
Ictidomys tridecemlineatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSSTOG00000007121
T061460_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf3
M00758_2.00
Mus musculus
NNRTKAYNN
NNRTMAYNN
PBM
Weirauch et al.(2013)
pTH2684
0.929
0.984
Atf3
M01807_2.00
Mus musculus
GATGACGY
RCGTCATC
PBM
Weirauch et al.(2014)
pTH5018
0.929
0.984
Atf3
M08825_2.00
Mus musculus
VTGACTCAB
VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A
0.929
0.984
JDP2
M02836_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_1
0.881
0.742
JDP2
M02837_2.00
Homo sapiens
NRTGACGTCATB
VATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_2
0.881
0.742
JDP2
M02838_2.00
Homo sapiens
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_3
0.881
0.742
JDP2
M02839_2.00
Homo sapiens
NRTGACGTCATN
NATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_4
0.881
0.742
JDP2
M04285_2.00
Homo sapiens
NATGASTCATV
BATGASTCATN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1
0.881
0.742
JDP2
M04286_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2
0.881
0.742
JDP2
M04289_2.00
Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1
0.881
0.742
JDP2
M04290_2.00
Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2
0.881
0.742
JDP2
M04287_2.00
Homo sapiens
BATGASTCAYN
NRTGASTCATV
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1
0.881
0.742
JDP2
M04288_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2
0.881
0.742
JDP2
M04291_2.00
Homo sapiens
NRTGASTCAYN
NRTGASTCAYN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1
0.881
0.742
JDP2
M04292_2.00
Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2
0.881
0.742
Jdp2
M00125_2.00
Mus musculus
NRTGAYDNNN
NNNHRTCAYN
PBM
Badis et al.(2009)
Jundm2_0911
0.879
0.742
Jdp2
M01810_2.00
Mus musculus
NNTGACGYMW
WKRCGTCANN
PBM
Weirauch et al.(2014)
pTH5464
0.879
0.742
Jdp2
M02861_2.00
Mus musculus
ATGASTCAT
ATGASTCAT
SELEX
Jolma et al.(2013)
Jdp2_1
0.879
0.742
Jdp2
M02862_2.00
Mus musculus
VATGACGTCAYN
NRTGACGTCATB
SELEX
Jolma et al.(2013)
Jdp2_2
0.879
0.742
Jdp2
M10033_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$JDP2_03
0.879
0.742
ATF3
M04321_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX
0.823
0.532
ATF3
M04323_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX
0.823
0.532
ATF3
M04032_2.00
Homo sapiens
RTGACGTCAK
MTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1
0.823
0.532
ATF3
M04033_2.00
Homo sapiens
RTGACTCAY
RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2
0.823
0.532
ATF3
M07822_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha
0.823
0.532
ATF3
M07823_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha
0.823
0.532
ATF3
M07824_2.00
Homo sapiens
VGTCACGTGRB
VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha
0.823
0.532
ATF3
M07825_2.00
Homo sapiens
VRTSACGTVR
YBACGTSAYB
ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard
0.823
0.532
ATF3
M08187_2.00
Homo sapiens
GTCACGTG
CACGTGAC
ChIP-seq
Contrino et al.(2012)
Mv41
0.823
0.532
ATF3
M08188_2.00
Homo sapiens
NRTGASTCAY
RTGASTCAYN
ChIP-seq
Contrino et al.(2012)
Mv43
0.823
0.532
ATF3
M08801_2.00
Homo sapiens
RRTSACGTVRB
VYBACGTSAYY
Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A
0.823
0.532
ATF3
M09489_2.00
Homo sapiens
NVTGASTCABNN
NNVTGASTCABN
Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912
0.823
0.532
ATF3
M09977_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_02
0.823
0.532
ATF3
M09978_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_05
0.823
0.532
ATF3
M09979_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_01
0.823
0.532
ATF3
M09980_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_02
0.823
0.532
ATF3
M09981_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6
0.823
0.532
ATF3
M04322_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX
0.823
0.532
ATF3
M04324_2.00
Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX
0.823
0.532
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.789
0.565
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000006350
bZIP
84
145
EEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYM
Links
Other
bZIP
family TFs
Other
Ictidomys tridecemlineatus
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_01837
Exophiala aquamarina
A1O9_01837
I
AUEXF2481DRAFT_4029
Aureobasidium subglaciale
AUEXF2481DRAFT_4029
I
AUEXF2481DRAFT_456199
Aureobasidium subglaciale
AUEXF2481DRAFT_456199
I
BDDG_02031
Blastomyces dermatitidis
BDDG_02031
I
CFIO01_03805
Colletotrichum fioriniae
CFIO01_03805
I
CGGC5_3013
Colletotrichum gloeosporioides
CGGC5_3013
I
CIMG_04661
Coccidioides immitis
CIMG_04661
I
Cob_02984
Colletotrichum orbiculare
Cob_02984
I
CSUB01_02738
Colletotrichum sublineola
CSUB01_02738
I
DOTSEDRAFT_71818
Dothistroma septosporum
DOTSEDRAFT_71818
N
estExt_Genewise1Plus.C_chr_50835
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_50835
N
EURHEDRAFT_528519
Aspergillus ruber
EURHEDRAFT_528519
I
F503_01249
Ophiostoma piceae uamh
F503_01249
I
FFUJ_09498
Fusarium fujikuroi
FFUJ_09498
N
fgenesh1_pg.C_chr_6.1000096
Pichia stipitis
fgenesh1_pg.C_chr_6.1000096
I
FGRRES_16159
Fusarium graminearum
FGRRES_16159
N
FOXG_11581
Fusarium oxysporum
FOXG_11581
N
FPSE_05211
Fusarium pseudograminearum
FPSE_05211
N
FVEG_10243
Fusarium verticillioides
FVEG_10243
N
GLRG_09907
Colletotrichum graminicola
GLRG_09907
I
gw1.11.59.1
Mycosphaerella fijiensis
gw1.11.59.1
N
H101_03862
Trichophyton interdigitale
H101_03862
I
M437DRAFT_56308
Aureobasidium melanogenum
M437DRAFT_56308
I
M438DRAFT_317248
Aureobasidium pullulans
M438DRAFT_317248
I
M438DRAFT_344531
Aureobasidium pullulans
M438DRAFT_344531
I
MAC_02441
Metarhizium acridum
MAC_02441
I
MAJ_10813
Metarhizium majus
MAJ_10813
I
MANI_013399
Metarhizium anisopliae
MANI_013399
N
MBR_05903
Metarhizium brunneum
MBR_05903
N
MCYG_05833
Microsporum canis
MCYG_05833
I
MCYG_05833
Arthroderma otae
MCYG_05833
I
MGU_06573
Metarhizium guizhouense
MGU_06573
N
MGYG_06143
Microsporum gypseum
MGYG_06143
I
MYCFIDRAFT_142135
Pseudocercospora fijiensis
MYCFIDRAFT_142135
N
Mycgr3G72224
Zymoseptoria tritici
Mycgr3G72224
N
NFIA_004700
Neosartorya fischeri
CADNFIAG00000040
N
PABG_05542
Paracoccidioides brasiliensis
PABG_05542
N
PDE_09179
Penicillium oxalicum
PDE_09179
I
PEX1_066340
Penicillium expansum
PEX1_066340
I
PICST_32615
Scheffersomyces stipitis
PICST_32615
I
PITC_033600
Penicillium italicum
PITC_033600
I
PV05_03582
Exophiala xenobiotica
PV05_03582
I
PV09_06702
Verruconis gallopava
PV09_06702
I
SEPMUDRAFT_157964
Sphaerulina musiva
SEPMUDRAFT_157964
N
TEQG_06790
Trichophyton equinum
TEQG_06790
I
TESG_06981
Trichophyton tonsurans
TESG_06981
I
TSTA_020390
Talaromyces stipitatus
TSTA_020390
I
U727_00434270371
Penicillium solitum
U727_00434270371
I
VDAG_00765
Verticillium dahliae
VDAG_00765
I
VDBG_01161
Verticillium alfalfae
VDBG_01161
I
VDBG_01161
Verticillium albo atrum
VDBG_01161
I
VHEMI02369
Torrubiella hemipterigena
VHEMI02369
N
Z519_01437
Cladophialophora bantiana
Z519_01437
I