CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0004s17080
(
Populus trichocarpa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
POPTR_0004s17080
T066947_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20942.1
M01159_2.00
Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN
PBM
Lambert et al.(2019)
pTH11276
0.812
0.841
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0004s17080.1
bZIP
427
489
ADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNN
Links
Other
bZIP
family TFs
Other
Populus trichocarpa
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_00240
Arthroderma benhamiae
ARB_00240
I
0.000
BDDG_07988
Blastomyces dermatitidis
BDDG_07988
N
0.000
H101_00939
Trichophyton interdigitale
H101_00939
I
0.000
H102_02125
Trichophyton rubrum
H102_02125
I
0.000
H105_02141
Trichophyton soudanense
H105_02141
I
0.000
HCBG_00368
Histoplasma capsulatum
HCBG_00368
N
0.000
MCYG_05706
Microsporum canis
MCYG_05706
I
0.000
MCYG_05706
Arthroderma otae
MCYG_05706
I
0.000
MGYG_02800
Microsporum gypseum
MGYG_02800
I
0.000
PABG_01118
Paracoccidioides brasiliensis
PABG_01118
N
0.000
TRV_05232
Trichophyton verrucosum
TRV_05232
I
0.000