CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g033730.1
(
Solanum lycopersicum
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Solyc03g033730.1
T068199_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.783
0.469
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.783
0.469
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g033730.1.1
bZIP
15
79
KLMDQRKRKRMISNRESARRSRMRKQQLSDDLTSQVNQFKEQNNQIATNINMMTHLFLNVEAENS
Links
Other
bZIP
family TFs
Other
Solanum lycopersicum
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29830.m001444
Ricinus communis
29830.m001444
N
0.000
AMTR_s00021p00218190
Amborella trichopoda
AMTR_s00021p00218190
N
0.000
Aquca_015_00350
Aquilegia coerulea
Aquca_015_00350
N
0.000
Bo1g006340
Brassica oleracea
Bo1g006340
N
0.000
Bra011626
Brassica rapa
Bra011626
N
0.000
Cagra.2350s0102
Capsella grandiflora
Cagra.2350s0102
N
0.000
Carubv10005148m.g
Capsella rubella
Carubv10005148m.g
N
0.000
cassava26650.m1
Manihot esculenta
cassava26650.m1
N
0.000
chr2.CM0272.20.nd
Lotus japonicus
chr2.CM0272.20.nd
N
0.000
Ciclev10027531m.g
Citrus clementina
Ciclev10027531m.g
N
0.000
F775_07483
Aegilops tauschii
F775_07483
I
0.000
fgenesh1_pg.scaffold_823000001
Physcomitrella patens
fgenesh1_pg.scaffold_823000001
N
0.000
fgenesh2_kg.7__520__AT4G35590.1
Arabidopsis lyrata
fgenesh2_kg.7__520__AT4G35590.1
N
0.000
gene13055-v1.0-hybrid
Fragaria vesca
gene13055-v1.0-hybrid
N
0.000
GLYMA01G36360
Glycine max
GLYMA01G36360
N
0.000
GLYMA11G09080
Glycine max
GLYMA11G09080
N
0.000
Gorai.003G002500
Gossypium raimondii
Gorai.003G002500
N
0.000
GSMUA_Achr8G13370_001
Musa acuminata
GSMUA_Achr8G13370_001
N
0.000
MDP0000125133
Malus domestica
MDP0000125133
N
0.000
MDP0000192895
Malus domestica
MDP0000192895
N
0.000
MDP0000215412
Malus domestica
MDP0000215412
N
0.000
MDP0000291622
Malus domestica
MDP0000291622
N
0.000
MLOC_12609
Hordeum vulgare
MLOC_12609
I
0.000
MLOC_59560
Hordeum vulgare
MLOC_59560
I
0.000
MTR_5g024070
Medicago truncatula
MTR_5g024070
N
0.000
OGLUM01G22860
Oryza glumaepatula
OGLUM01G22860
N
0.000
orange1.1g039420m.g
Citrus sinensis
orange1.1g039420m.g
N
0.000
Pavir.Ab02992
Panicum virgatum
Pavir.Ab02992
I
0.000
Pm026816
Prunus mume
Pm026816
N
0.000
PRUPE_ppa011563mg
Prunus persica
PRUPE_ppa011563mg
N
0.000
RKD5
Arabidopsis thaliana
AT4G35590
N
0.000
SELMODRAFT_408627
Selaginella moellendorffii
SELMODRAFT_408627
N
0.000
SELMODRAFT_73108
Selaginella moellendorffii
SELMODRAFT_73108
N
0.000
SELMODRAFT_73109
Selaginella moellendorffii
SELMODRAFT_73109
N
0.000
SELMODRAFT_73110
Selaginella moellendorffii
SELMODRAFT_73110
N
0.000
SELMODRAFT_73111
Selaginella moellendorffii
SELMODRAFT_73111
N
0.000
SELMODRAFT_73112
Selaginella moellendorffii
SELMODRAFT_73112
N
0.000
SELMODRAFT_73116
Selaginella moellendorffii
SELMODRAFT_73116
N
0.000
SELMODRAFT_73117
Selaginella moellendorffii
SELMODRAFT_73117
N
0.000
SELMODRAFT_73118
Selaginella moellendorffii
SELMODRAFT_73118
N
0.000
SELMODRAFT_73278
Selaginella moellendorffii
SELMODRAFT_73278
N
0.000
TCM_000070
Theobroma cacao
TCM_000070
N
0.000
Thhalv10027037m.g
Eutrema salsugineum
Thhalv10027037m.g
N
0.000
Traes_7DS_405F08A53
Triticum aestivum
Traes_7DS_405F08A53
I
0.000
TRIUR3_19503
Triticum urartu
TRIUR3_19503
I
0.000