Alligator_sinensis_CCG003052.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG003052.1 T069835_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CEBPE
M02824_2.00 		Homo sapiens
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
CEBPE_1 		0.857 0.812
CEBPE
M02729_2.00 		Homo sapiens
VTTDYRHAAY
RTTDYRHAAB		 SELEX
Jolma et al.(2010)
CEBPE_dimer 		0.857 0.812
CEBPE
M04227_2.00 		Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN		 SELEX
Yin et al.(2017)
CEBPE_eDBD_HT-SELEX 		0.857 0.812
CEBPE
M04009_2.00 		Homo sapiens
NVTKRYRCAABN
NVTTGYRYMABN		 SELEX
Rodriguez-Martinez et al.(2017)
CEBPE.1 		0.857 0.812
CEBPE
M08783_2.00 		Homo sapiens
VHDATTDCVHAM
KTDBGHAATHDB		 Misc
Kulakovskiy et al.(2013)
CEBPE_HUMAN.H11MO.0.A 		0.857 0.812
CEBPE
M09927_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPE_01 		0.857 0.812
CEBPE
M09928_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPE_Q6_01 		0.857 0.812
CEBPE
M09929_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPE_Q6 		0.857 0.812
CEBPE
M04228_2.00 		Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN		 SELEX
Yin et al.(2017)
CEBPE_eDBD_Methyl-HT-SELEX 		0.857 0.812
Cebpe
M01815_2.00 		Mus musculus
TKDYGCAA
TTGCRHMA		 PBM
Weirauch et al.(2014)
pTH5253 		0.857 0.797
Cebpe
M08836_2.00 		Mus musculus
VHDATTDCVHAM
KTDBGHAATHDB		 Misc
Kulakovskiy et al.(2013)
CEBPE_MOUSE.H11MO.0.A 		0.857 0.797
CEBPB
M02851_2.00 		Homo sapiens
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
CEBPB_1 		0.809 0.703
CEBPB
M02852_2.00 		Homo sapiens
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
CEBPB_2 		0.809 0.703
CEBPB
M04331_2.00 		Homo sapiens
NVTTRCGCAAYN
NRTTGCGYAABN		 SELEX
Yin et al.(2017)
CEBPB_eDBD_HT-SELEX 		0.809 0.703
CEBPB
M05840_2.00 		Homo sapiens
RTTRCGYAAYM
KRTTRCGYAAY		 SMiLE-seq
Isakova et al.(2017)
CEBPb 		0.809 0.703
CEBPB
M07830_2.00 		Homo sapiens
NNDRTKDYGCAAYN
NRTTGCRHMAYHNN		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CEBPB_Stanford 		0.809 0.703
CEBPB
M07831_2.00 		Homo sapiens
RTKRYGCAAYV
BRTTGCRYMAY		 ChIP-seq
Gerstein et al.(2012)
HepG2_CEBPB_Stanford 		0.809 0.703
CEBPB
M07832_2.00 		Homo sapiens
DRTKRYGCAAYVNN
NNBRTTGCRYMAYH		 ChIP-seq
Gerstein et al.(2012)
K562_CEBPB_Stanford 		0.809 0.703
CEBPB
M08804_2.00 		Homo sapiens
DRTKDHGCAAYV
BRTTGCDHMAYH		 Misc
Kulakovskiy et al.(2013)
CEBPB_HUMAN.H11MO.0.A 		0.809 0.703
CEBPB
M09993_2.00 		Homo sapiens
RNRTKDDGHAAKNN
NNMTTDCHHMAYNY		 Transfac
Matys et al.(2006)
V$CEBPB_01 		0.809 0.703
CEBPB
M09994_2.00 		Homo sapiens
NDRTKDHGCAABMH
DKVTTGCDHMAYHN		 Transfac
Matys et al.(2006)
V$CEBPB_02 		0.809 0.703
CEBPB
M09995_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_04 		0.809 0.703
CEBPB
M09996_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_07 		0.809 0.703
CEBPB
M09997_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_Q3 		0.809 0.703
CEBPB
M09998_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CEBPB_Q6 		0.809 0.703
CEBPB
M04332_2.00 		Homo sapiens
NRTTRCGCAAYN
NRTTGCGYAAYN		 SELEX
Yin et al.(2017)
CEBPB_eDBD_Methyl-HT-SELEX 		0.809 0.703
Cebpb
M02636_2.00 		Mus musculus
VTKDYGYAAB
VTTRCRHMAB		 PBM
Tillo et al.(2017)
CEBPB_C 		0.801 0.688
Cebpb
M00999_2.00 		Mus musculus
VTKDYGYAAB
VTTRCRHMAB		 PBM
Mann et al.(2013)
CEBPB_UM_HK 		0.801 0.688
Cebpb
M00761_2.00 		Mus musculus
NTKDHGHAAB
VTTDCDHMAN		 PBM
Weirauch et al.(2013)
pTH3208 		0.801 0.688
Cebpb
M01818_2.00 		Mus musculus
VTKDYGYAAB
VTTRCRHMAB		 PBM
Weirauch et al.(2014)
pTH5460 		0.801 0.688
Cebpb
M02867_2.00 		Mus musculus
VTTRCGCAAY
RTTGCGYAAB		 SELEX
Jolma et al.(2013)
Cebpb_1 		0.801 0.688
Cebpb
M08841_2.00 		Mus musculus
DRTKDHGCAAB
VTTGCDHMAYH		 Misc
Kulakovskiy et al.(2013)
CEBPB_MOUSE.H11MO.0.A 		0.801 0.688
Cebpb
M09498_2.00 		Mus musculus
GTTGYRCAAT
ATTGYRCAAC		 Misc
Heinz et al.(2010)
ThioMac-CEBPb_GSE21512 		0.801 0.688
Cebpb
M02633_2.00 		Mus musculus
VTKDNGHAAB
VTTDCNHMAB		 PBM
Tillo et al.(2017)
CEBPB_5hmC 		0.801 0.688
Cebpb
M02634_2.00 		Mus musculus
TKDYGYAAYN
NRTTRCRHMA		 PBM
Tillo et al.(2017)
CEBPB_5mCG 		0.801 0.688
Cebpb
M02635_2.00 		Mus musculus
YKDYGHAAYN
NRTTDCRHMR		 PBM
Tillo et al.(2017)
CEBPB_5mC 		0.801 0.688
Cebpb
M00998_2.00 		Mus musculus
NTTDCGCAA
TTGCGHAAN		 PBM
Mann et al.(2013)
CEBPB_M_HK 		0.801 0.688
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003052.1 bZIP 33 96

Links

Other bZIP family TFs
Other Alligator sinensis TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP26309 Atta cephalotes ACEP26309 I 0.785
ACYPI003971 Acyrthosiphon pisum ACYPI003971 I 0.798
cebpa Danio rerio ENSDARG00000036074 I 0.790
cebpa Takifugu rubripes ENSTRUG00000006383 I 0.787
CEBPB Anolis carolinensis ENSACAG00000015567 I 0.801
CEBPB Canis familiaris ENSCAFG00000031326 I 0.809
CEBPB Callithrix jacchus ENSCJAG00000000526 I 0.809
cebpb Danio rerio ENSDARG00000042725 I 0.782
CEBPB Dasypus novemcinctus ENSDNOG00000041573 I 0.809
CEBPB Homo sapiens ENSG00000172216 D 0.809
CEBPB Gallus gallus ENSGALG00000008014 I 0.801
CEBPB Gorilla gorilla ENSGGOG00000025010 I 0.809
CEBPB Myotis lucifugus ENSMLUG00000002060 I 0.809
Cebpb Mus musculus ENSMUSG00000056501 D 0.801
CEBPB Oryctolagus cuniculus ENSOCUG00000024667 I 0.809
CEBPB Otolemur garnettii ENSOGAG00000026467 I 0.809
cebpb Oryzias latipes ENSORLG00000015032 I 0.782
CEBPB Pan troglodytes ENSPTRG00000041263 I 0.809
CEBPB Pteropus vampyrus ENSPVAG00000003541 I 0.809
Cebpb Rattus norvegicus ENSRNOG00000057347 I 0.809
CEBPB Taeniopygia guttata ENSTGUG00000008707 I 0.801
cebpb Takifugu rubripes ENSTRUG00000007449 I 0.782
CEBPB Tursiops truncatus ENSTTRG00000003985 I 0.809
cebpb Xenopus tropicalis XB-GENE-479779 I 0.803
cebpb.L Xenopus laevis XB-GENE-865306 I 0.803
CEBPE Anolis carolinensis ENSACAG00000007268 I 0.854
CEBPE Bos taurus ENSBTAG00000005952 I 0.857
CEBPE Callithrix jacchus ENSCJAG00000008065 I 0.857
CEBPE Cavia porcellus ENSCPOG00000014049 I 0.857
CEBPE Equus caballus ENSECAG00000012883 I 0.857
CEBPE Erinaceus europaeus ENSEEUG00000005848 I 0.857
CEBPE Echinops telfairi ENSETEG00000000035 I 0.853
CEBPE Felis catus ENSFCAG00000002334 I 0.857
CEBPE Homo sapiens ENSG00000092067 D 0.857
CEBPE Gorilla gorilla ENSGGOG00000007419 I 0.857
CEBPE Loxodonta africana ENSLAFG00000031400 I 0.853
CEBPE Myotis lucifugus ENSMLUG00000030209 I 0.857
CEBPE Macaca mulatta ENSMMUG00000019652 I 0.857
CEBPE Monodelphis domestica ENSMODG00000004586 I 0.857
Cebpe Mus musculus ENSMUSG00000052435 D 0.857
CEBPE Oryctolagus cuniculus ENSOCUG00000022235 I 0.857
CEBPE Otolemur garnettii ENSOGAG00000001312 I 0.857
CEBPE Procavia capensis ENSPCAG00000015039 I 0.853
CEBPE Pan troglodytes ENSPTRG00000006162 I 0.857
CEBPE Pteropus vampyrus ENSPVAG00000005264 I 0.818
Cebpe Rattus norvegicus ENSRNOG00000014282 I 0.857
CEBPE Sus scrofa ENSSSCG00000002033 I 0.857
CEBPE Tursiops truncatus ENSTTRG00000017229 I 0.857
cebpe Xenopus tropicalis XB-GENE-853430 I 0.802
Cflo_01516--XP_394681.2_APIME Camponotus floridanus Cflo_01516--XP_394681.2_APIME I 0.785
CLEC002077 Cimex lectularius CLEC002077 I 0.804
Cmyd_10017449 Chelonia mydas Cmyd_10017449 I 0.804
EBP Gallus gallus ENSGALG00000026525 I 0.804
ENSAMEG00000007625 Ailuropoda melanoleuca ENSAMEG00000007625 I 0.857
ENSAMEG00000008255 Ailuropoda melanoleuca ENSAMEG00000008255 I 0.796
ENSAMEG00000013456 Ailuropoda melanoleuca ENSAMEG00000013456 I 0.809
ENSAMXG00000018723 Astyanax mexicanus ENSAMXG00000018723 I 0.782
ENSAMXG00000026122 Astyanax mexicanus ENSAMXG00000026122 I 0.792
ENSCAFG00000011433 Canis familiaris ENSCAFG00000011433 I 0.857
ENSCPOG00000000811 Cavia porcellus ENSCPOG00000000811 I 0.809
ENSCSAG00000016086 Chlorocebus sabaeus ENSCSAG00000016086 I 0.857
ENSCSAG00000018746 Chlorocebus sabaeus ENSCSAG00000018746 I 0.809
ENSFALG00000014081 Ficedula albicollis ENSFALG00000014081 I 0.801
ENSGMOG00000019534 Gadus morhua ENSGMOG00000019534 I 0.782
ENSLACG00000002076 Latimeria chalumnae ENSLACG00000002076 I 0.795
ENSLACG00000005924 Latimeria chalumnae ENSLACG00000005924 I 0.803
ENSLAFG00000026180 Loxodonta africana ENSLAFG00000026180 I 0.809
ENSLOCG00000017586 Lepisosteus oculatus ENSLOCG00000017586 I 0.790
ENSLOCG00000018358 Lepisosteus oculatus ENSLOCG00000018358 I 0.808
ENSMEUG00000000063 Macropus eugenii ENSMEUG00000000063 I 0.809
ENSMICG00000002591 Microcebus murinus ENSMICG00000002591 I 0.857
ENSMMUG00000004874 Macaca mulatta ENSMMUG00000004874 I 0.809
ENSMODG00000016314 Monodelphis domestica ENSMODG00000016314 I 0.809
ENSMPUG00000006815 Mustela putorius furo ENSMPUG00000006815 I 0.857
ENSMPUG00000019019 Mustela putorius furo ENSMPUG00000019019 I 0.809
ENSNLEG00000014958 Nomascus leucogenys ENSNLEG00000014958 I 0.857
ENSOANG00000007645 Ornithorhynchus anatinus ENSOANG00000007645 I 0.857
ENSOARG00000004414 Ovis aries ENSOARG00000004414 I 0.796
ENSOARG00000013395 Ovis aries ENSOARG00000013395 I 0.809
ENSOARG00000019360 Ovis aries ENSOARG00000019360 I 0.857
ENSONIG00000021137 Oreochromis niloticus ENSONIG00000021137 I 0.782
ENSP00000206513 Macaca fascicularis ENSP00000206513 I 0.857
ENSP00000206513-D1 Bos grunniens ENSP00000206513-D1 I 0.857
ENSPANG00000007537 Papio anubis ENSPANG00000007537 I 0.809
ENSPANG00000019646 Papio anubis ENSPANG00000019646 I 0.857
ENSPFOG00000020954 Poecilia formosa ENSPFOG00000020954 I 0.782
ENSPMAG00000004124 Petromyzon marinus ENSPMAG00000004124 I 0.809
ENSPPYG00000005659 Pongo abelii ENSPPYG00000005659 I 0.857
ENSPPYG00000011124 Pongo abelii ENSPPYG00000011124 I 0.809
ENSSHAG00000013989 Sarcophilus harrisii ENSSHAG00000013989 I 0.857
ENSSSCG00000024816 Sus scrofa ENSSSCG00000024816 I 0.809
ENSSSCG00000028739 Sus scrofa ENSSSCG00000028739 I 0.809
ENSSTOG00000007204 Ictidomys tridecemlineatus ENSSTOG00000007204 I 0.857
ENSTBEG00000017246 Tupaia belangeri ENSTBEG00000017246 I 0.857
ENSXMAG00000019665 Xiphophorus maculatus ENSXMAG00000019665 I 0.782
GB44204 Apis mellifera GB44204 I 0.785
HHAL004160-PA Halyomorpha halys HHAL004160-PA I 0.804
Hsal_02456--XP_394681.2_APIME Harpegnathos saltator Hsal_02456--XP_394681.2_APIME I 0.793
L798_13978 Zootermopsis nevadensis L798_13978 I 0.809
LDEC017703 Leptinotarsa decemlineata LDEC017703 I 0.808
Myotis_brandtii_CEBPE_10009435 Myotis brandtii Myotis_brandtii_CEBPE_10009435 I 0.857
NEMVEDRAFT_v1g114346 Nematostella vectensis NEMVEDRAFT_v1g114346 I 0.810
NV14868 Nasonia vitripennis NV14868 I 0.793
Ogr08265 Ophisaurus gracilis Ogr08265 I 0.854
Ogr08532 Ophisaurus gracilis Ogr08532 I 0.801
PHUM433250 Pediculus humanus PHUM433250 I 0.809
Pvit_03335 Pogona vitticeps Pvit_03335 I 0.800
SINV13631 Solenopsis invicta SINV13631 I 0.785
TC009220 Tribolium castaneum TC009220 I 0.808
YQE_11799 Dendroctonus ponderosae YQE_11799 I 0.808