Gfo_R012905 (Geospiza fortis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Gfo_R012905 T070223_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Batf
M08829_2.00 		Mus musculus
NWSASTCAWHNNDDDANH
DNTHHHNNDWTGASTSWN		 Misc
Kulakovskiy et al.(2013)
BATF_MOUSE.H11MO.0.A 		0.866 0.873
Batf
M09495_2.00 		Mus musculus
VTGASTCABH
DVTGASTCAB		 Misc
Heinz et al.(2010)
Th17-BATF_GSE39756 		0.866 0.873
BATF
M04307_2.00 		Homo sapiens
NVVYGMCACN
NGTGKCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_HT-SELEX 		0.855 0.857
BATF
M07821_2.00 		Homo sapiens
TBASTCAWWNYDRRA
TYYHRNWWTGASTVA		 ChIP-seq
Gerstein et al.(2012)
GM12878_BATF_HudsonAlpha 		0.855 0.857
BATF
M08799_2.00 		Homo sapiens
NWBASTCAWWHHRRRAVH
DBTYYYDDWWTGASTVWN		 Misc
Kulakovskiy et al.(2013)
BATF_HUMAN.H11MO.0.A 		0.855 0.857
BATF
M09971_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_01 		0.855 0.857
BATF
M09972_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_02 		0.855 0.857
BATF
M09973_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_03 		0.855 0.857
BATF
M09974_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF_04 		0.855 0.857
BATF
M04308_2.00 		Homo sapiens
NVVYGACACN
NGTGTCRBBN		 SELEX
Yin et al.(2017)
BATF_FL_Methyl-HT-SELEX 		0.855 0.857
BATF3
M02833_2.00 		Homo sapiens
YGATGACGTCATCA
TGATGACGTCATCR		 SELEX
Jolma et al.(2013)
BATF3_1 		0.822 0.667
BATF3
M04268_2.00 		Homo sapiens
BRTGACGTCABN
NVTGACGTCAYV		 SELEX
Yin et al.(2017)
BATF3_eDBD_HT-SELEX 		0.822 0.667
BATF3
M04270_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_HT-SELEX 		0.822 0.667
BATF3
M04025_2.00 		Homo sapiens
GRTGACGTCAYC
GRTGACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.1 		0.822 0.667
BATF3
M04026_2.00 		Homo sapiens
GRTGACGTGGS
SCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
BATF3.2 		0.822 0.667
BATF3
M08794_2.00 		Homo sapiens
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_HUMAN.H11MO.0.B 		0.822 0.667
BATF3
M09962_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BATF3_02 		0.822 0.667
BATF3
M04269_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_eDBD_Methyl-HT-SELEX 		0.822 0.667
BATF3
M04271_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
BATF3_FL_Methyl-HT-SELEX 		0.822 0.667
Batf3
M08826_2.00 		Mus musculus
NHSTCADWNDGAAASHN
NDSTTTCHNWHTGASDN		 Misc
Kulakovskiy et al.(2013)
BATF3_MOUSE.H11MO.0.A 		0.814 0.619
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R012905 bZIP 26 88

Links

Other bZIP family TFs
Other Geospiza fortis TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10002814 Chelonia mydas Cmyd_10002814 I
ENSAMEG00000002678 Ailuropoda melanoleuca ENSAMEG00000002678 I
ENSCSAG00000006994 Chlorocebus sabaeus ENSCSAG00000006994 I
ENSMEUG00000005929 Macropus eugenii ENSMEUG00000005929 I
ENSNLEG00000003719 Nomascus leucogenys ENSNLEG00000003719 I
ENSP00000398108 Macaca fascicularis ENSP00000398108 I
ENSP00000398108-D1 Bos grunniens ENSP00000398108-D1 I
ENSPANG00000023421 Papio anubis ENSPANG00000023421 I
ENSPPYG00000018155 Pongo abelii ENSPPYG00000018155 I
ENSSTOG00000027760 Ictidomys tridecemlineatus ENSSTOG00000027760 I
Myotis_brandtii_ZNF777_10025635 Myotis brandtii Myotis_brandtii_ZNF777_10025635 I
Pvit_14802 Pogona vitticeps Pvit_14802 I
Zfp777 Mus musculus ENSMUSG00000071477 I
Zfp777 Rattus norvegicus ENSRNOG00000033639 I
ZNF777 Pan troglodytes ENSPTRG00000023754 I
ZNF777 Anolis carolinensis ENSACAG00000017661 I
ZNF777 Bos taurus ENSBTAG00000002810 I
ZNF777 Canis familiaris ENSCAFG00000025145 I
ZNF777 Callithrix jacchus ENSCJAG00000032232 I
ZNF777 Cavia porcellus ENSCPOG00000014359 I
ZNF777 Tursiops truncatus ENSTTRG00000015695 I
ZNF777 Dasypus novemcinctus ENSDNOG00000003957 I
ZNF777 Sus scrofa ENSSSCG00000016775 I
ZNF777 Pteropus vampyrus ENSPVAG00000010873 I
ZNF777 Loxodonta africana ENSLAFG00000006716 I
ZNF777 Felis catus ENSFCAG00000007553 I
ZNF777 Procavia capensis ENSPCAG00000003810 I
ZNF777 Homo sapiens ENSG00000196453 D
ZNF777 Oryctolagus cuniculus ENSOCUG00000007975 I
ZNF777 Gorilla gorilla ENSGGOG00000016445 I
ZNF777 Monodelphis domestica ENSMODG00000002329 I
ZNF777 Macaca mulatta ENSMMUG00000002497 I
ZNF777 Myotis lucifugus ENSMLUG00000017103 I