CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.353000
(
Cucumis sativus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Cucsa.353000
T070693_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27149.1
M01164_2.00
Cannabis sativa
TBACGTGK
MCACGTVA
PBM
Lambert et al.(2019)
pTH11283
0.801
0.508
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.353000.1
bZIP
51
113
DEERRRKRMISNRESARRSRLRKKRHLENLAIQTDRLKMKNQELKRQLNLVVNRCYMVRRQNE
Links
Other
bZIP
family TFs
Other
Cucumis sativus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava8864.m1
Manihot esculenta
cassava8864.m1
I
0.786
Cla010123
Citrullus lanatus
Cla010123
I
0.893
Cla022990
Citrullus lanatus
Cla022990
I
0.798
Cucsa.395470
Cucumis sativus
Cucsa.395470
I
0.803
Lus10007726.g
Linum usitatissimum
Lus10007726.g
N
0.789
Lus10018662.g
Linum usitatissimum
Lus10018662.g
I
0.799
PK27149.1
Cannabis sativa
PK27149.1
D
0.801
POPTR_0002s11660
Populus trichocarpa
POPTR_0002s11660
I
0.796
POPTR_0014s01390
Populus trichocarpa
POPTR_0014s01390
I
0.794