estExt_fgenesh2_pg.C_1140009 (Branchiostoma floridae)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 estExt_fgenesh2_pg.C_1140009 T070827_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
jund
M01842_2.00 		Xenopus tropicalis
NTGACDCAH
DTGHGTCAN		 PBM
Weirauch et al.(2014)
pTH8562 		0.884 0.875
Jund
M01001_2.00 		Mus musculus
NTGACKYAH
DTRMGTCAN		 PBM
Mann et al.(2013)
JUND_UM_HK 		0.882 0.828
Jund
M01822_2.00 		Mus musculus
RTGACKCAH
DTGMGTCAY		 PBM
Weirauch et al.(2014)
pTH5462 		0.882 0.828
JUND
M04281_2.00 		Homo sapiens
NRTGACGCAYN
NRTGCGTCAYN		 SELEX
Yin et al.(2017)
JUND_eDBD_HT-SELEX_1 		0.882 0.828
JUND
M04282_2.00 		Homo sapiens
BRTKACGTCAYS
SRTGACGTMAYV		 SELEX
Yin et al.(2017)
JUND_eDBD_HT-SELEX_2 		0.882 0.828
JUND
M05836_2.00 		Homo sapiens
RTGACKCAYH
DRTGMGTCAY		 SMiLE-seq
Isakova et al.(2017)
JUND_primary 		0.882 0.828
JUND
M05837_2.00 		Homo sapiens
NNTKACGTCAB
VTGACGTMANN		 SMiLE-seq
Isakova et al.(2017)
JUND_secondary 		0.882 0.828
JUND
M08068_2.00 		Homo sapiens
NDNRATGABGTMATN
NATKACVTCATYNHN		 ChIP-seq
Mathelier et al.(2014)
MA0492.1 		0.882 0.828
JUND
M08067_2.00 		Homo sapiens
DRTGASTCATN
NATGASTCAYH		 ChIP-seq
Mathelier et al.(2014)
MA0491.1 		0.882 0.828
JUND
M07814_2.00 		Homo sapiens
NNTGASTCATWHHDRDANH
DNTHYHDDWATGASTCANN		 ChIP-seq
Gerstein et al.(2012)
GM12878_JUND_Stanford 		0.882 0.828
JUND
M07815_2.00 		Homo sapiens
VTGASTCAYCN
NGRTGASTCAB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_JUND_HudsonAlpha 		0.882 0.828
JUND
M07816_2.00 		Homo sapiens
DGATGASTCAYNBHN
NDVNRTGASTCATCH		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_JUND_Stanford 		0.882 0.828
JUND
M07817_2.00 		Homo sapiens
VTGASTCAYYHHN
NDDRRTGASTCAB		 ChIP-seq
Gerstein et al.(2012)
HepG2_JUND_HudsonAlpha 		0.882 0.828
JUND
M07818_2.00 		Homo sapiens
BDRTGACKYMWBNNN
NNNVWKRMGTCAYHV		 ChIP-seq
Gerstein et al.(2012)
HepG2_JUND_Stanford 		0.882 0.828
JUND
M07819_2.00 		Homo sapiens
BVTGACGTCAYYNN
NNRRTGACGTCABV		 ChIP-seq
Gerstein et al.(2012)
K562_JUND_Stanford 		0.882 0.828
JUND
M07820_2.00 		Homo sapiens
NGRTGASTCAYNBBB
VVVNRTGASTCAYCN		 ChIP-seq
Gerstein et al.(2012)
K562_JUND_UChicago 		0.882 0.828
JUND
M08797_2.00 		Homo sapiens
NRTGACTCABN
NVTGAGTCAYN		 Misc
Kulakovskiy et al.(2013)
JUND_HUMAN.H11MO.0.A 		0.882 0.828
Jund
M08846_2.00 		Mus musculus
RTGACTCABNN
NNVTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
JUND_MOUSE.H11MO.0.A 		0.882 0.828
JUND
M09487_2.00 		Homo sapiens
RTGACGTCAYNN
NNRTGACGTCAY		 Misc
Heinz et al.(2010)
K562-JunD 		0.882 0.828
JUND
M09966_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUND_01 		0.882 0.828
JUND
M09967_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUND_02 		0.882 0.828
JUND
M09968_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUND_Q6 		0.882 0.828
Jund
M01000_2.00 		Mus musculus
NRTGACTCAN
NTGAGTCAYN		 PBM
Mann et al.(2013)
JUND_M_HK 		0.882 0.828
JUND
M04283_2.00 		Homo sapiens
BATGASTCATB
VATGASTCATV		 SELEX
Yin et al.(2017)
JUND_eDBD_Methyl-HT-SELEX_1 		0.882 0.828
JUND
M04284_2.00 		Homo sapiens
BRTGACDCATV
BATGHGTCAYV		 SELEX
Yin et al.(2017)
JUND_eDBD_Methyl-HT-SELEX_2 		0.882 0.828
Jun
M00995_2.00 		Mus musculus
NTGACKYMH
DKRMGTCAN		 PBM
Mann et al.(2013)
JUN_UM_HK 		0.871 0.812
Jun
M01816_2.00 		Mus musculus
NTKACKYAD
HTRMGTMAN		 PBM
Weirauch et al.(2014)
pTH4337 		0.871 0.812
JUN
M04339_2.00 		Homo sapiens
NATGACGTCAYN
NRTGACGTCATN		 SELEX
Yin et al.(2017)
JUN_FL_HT-SELEX_1 		0.871 0.812
JUN
M04340_2.00 		Homo sapiens
NRTGACKCAYN
NRTGMGTCAYN		 SELEX
Yin et al.(2017)
JUN_FL_HT-SELEX_2 		0.871 0.812
JUN
M05841_2.00 		Homo sapiens
NATGACKCATN
NATGMGTCATN		 SMiLE-seq
Isakova et al.(2017)
JUN_primary 		0.871 0.812
JUN
M05842_2.00 		Homo sapiens
NNNDATGACGTMAHNVN
NBNDTKACGTCATHNNN		 SMiLE-seq
Isakova et al.(2017)
JUN_secondary 		0.871 0.812
JUN
M04037_2.00 		Homo sapiens
RTGACKCAY
RTGMGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
JUN.1 		0.871 0.812
JUN
M04038_2.00 		Homo sapiens
RTGACGTCAT
ATGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
JUN.2 		0.871 0.812
JUN
M08072_2.00 		Homo sapiens
ATKACMTCATHNN
NNDATGAKGTMAT		 ChIP-seq
Mathelier et al.(2014)
MA0488.1 		0.871 0.812
JUN
M08073_2.00 		Homo sapiens
DDDDDRTGASTCAB
VTGASTCAYHHHHH		 ChIP-seq
Mathelier et al.(2014)
MA0489.1 		0.871 0.812
JUN
M07834_2.00 		Homo sapiens
VATDSYHNNNNVVTGASKYM
KRMSTCABBNNNNDRSHATB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_CJUN_Stanford 		0.871 0.812
JUN
M07835_2.00 		Homo sapiens
DRTGACTCABN
NVTGAGTCAYH		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CJUN_Stanford 		0.871 0.812
JUN
M07836_2.00 		Homo sapiens
NRTGACRTCAYYNNN
NNNRRTGAYGTCAYN		 ChIP-seq
Gerstein et al.(2012)
HepG2_CJUN_Stanford 		0.871 0.812
JUN
M07837_2.00 		Homo sapiens
NDRDDRRTGASTCAY
RTGASTCAYYHHYHN		 ChIP-seq
Gerstein et al.(2012)
HUVEC_CJUN_Stanford 		0.871 0.812
JUN
M07838_2.00 		Homo sapiens
NRTGACTCABN
NVTGAGTCAYN		 ChIP-seq
Gerstein et al.(2012)
K562_CJUN_Stanford 		0.871 0.812
JUN
M08806_2.00 		Homo sapiens
DRTGACTCABN
NVTGAGTCAYH		 Misc
Kulakovskiy et al.(2013)
JUN_HUMAN.H11MO.0.A 		0.871 0.812
Jun
M08837_2.00 		Mus musculus
VTGACTCABN
NVTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
JUN_MOUSE.H11MO.0.A 		0.871 0.812
JUN
M10004_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CJUN_Q6 		0.871 0.812
JUN
M04341_2.00 		Homo sapiens
NATGACTCATN
NATGAGTCATN		 SELEX
Yin et al.(2017)
JUN_FL_Methyl-HT-SELEX_1 		0.871 0.812
JUN
M04342_2.00 		Homo sapiens
NATGASTCATN
NATGASTCATN		 SELEX
Yin et al.(2017)
JUN_FL_Methyl-HT-SELEX_2 		0.871 0.812
JUNB
M04329_2.00 		Homo sapiens
BRTGACGTCATN
NATGACGTCAYV		 SELEX
Yin et al.(2017)
JUNB_eDBD_HT-SELEX 		0.839 0.766
JUNB
M05838_2.00 		Homo sapiens
VTGACTCA
TGAGTCAB		 SMiLE-seq
Isakova et al.(2017)
JUNB_primary 		0.839 0.766
JUNB
M05839_2.00 		Homo sapiens
RTKACGTMAY
RTKACGTMAY		 SMiLE-seq
Isakova et al.(2017)
JUNB_secondary 		0.839 0.766
JUNB
M08070_2.00 		Homo sapiens
NRRTGASTCAB
VTGASTCAYYN		 ChIP-seq
Mathelier et al.(2014)
MA0490.1 		0.839 0.766
JUNB
M07829_2.00 		Homo sapiens
NDRTGASTCABNNNB
VNNNVTGASTCAYHN		 ChIP-seq
Gerstein et al.(2012)
K562_JUNB_UChicago 		0.839 0.766
JUNB
M08803_2.00 		Homo sapiens
NVTGACTCABH
DVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
JUNB_HUMAN.H11MO.0.A 		0.839 0.766
JUNB
M09992_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUNB_Q6 		0.839 0.766
JUNB
M04330_2.00 		Homo sapiens
BRTGASTCATV
BATGASTCAYV		 SELEX
Yin et al.(2017)
JUNB_eDBD_Methyl-HT-SELEX 		0.839 0.766
Junb
M00760_2.00 		Mus musculus
NNNNNNNN
NNNNNNNN		 PBM
Weirauch et al.(2013)
pTH3064 		0.839 0.750
Junb
M08838_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
JUNB_MOUSE.H11MO.0.A 		0.839 0.750
Jra
M03636_2.00 		Drosophila melanogaster
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Nitta et al.(2015)
Jra_1 		0.813 0.656
Jra
M06018_2.00 		Drosophila melanogaster
DMTGASTCAYS
SRTGASTCAKH		 B1H
Zhu et al.(2011)
kay_Jra_SANGER_5_FBgn0001291 		0.813 0.656
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1140009 bZIP 240 303

Links

Other bZIP family TFs
Other Branchiostoma floridae TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005911 Calypte anna Aan_R005911 N
Aan_R005912 Calypte anna Aan_R005912 N
Aan_R005913 Calypte anna Aan_R005913 I
Afo_R003312 Aptenodytes forsteri Afo_R003312 N
Afo_R003313 Aptenodytes forsteri Afo_R003313 N
Afo_R003314 Aptenodytes forsteri Afo_R003314 I
Alligator_sinensis_CCG011591.1 Alligator sinensis Alligator_sinensis_CCG011591.1 I
Alligator_sinensis_CCG011592.1 Alligator sinensis Alligator_sinensis_CCG011592.1 N
Alligator_sinensis_CCG011593.1 Alligator sinensis Alligator_sinensis_CCG011593.1 N
Brh_R011661 Buceros rhinoceros Brh_R011661 N
Brh_R011662 Buceros rhinoceros Brh_R011662 N
Brh_R011663 Buceros rhinoceros Brh_R011663 I
Cmyd_10015932 Chelonia mydas Cmyd_10015932 N
ENSAPLG00000007688 Anas platyrhynchos ENSAPLG00000007688 N
ENSAPLG00000007962 Anas platyrhynchos ENSAPLG00000007962 N
ENSAPLG00000007967 Anas platyrhynchos ENSAPLG00000007967 I
ENSFALG00000009558 Ficedula albicollis ENSFALG00000009558 N
ENSFALG00000009565 Ficedula albicollis ENSFALG00000009565 N
ENSGALG00000001136 Gallus gallus ENSGALG00000001136 N
ENSGALG00000027002 Gallus gallus ENSGALG00000027002 N
ENSMEUG00000001942 Macropus eugenii ENSMEUG00000001942 N
ENSMEUG00000013913 Macropus eugenii ENSMEUG00000013913 I
ENSMGAG00000001983 Meleagris gallopavo ENSMGAG00000001983 N
ENSMGAG00000002000 Meleagris gallopavo ENSMGAG00000002000 N
ENSMODG00000008220 Monodelphis domestica ENSMODG00000008220 N
ENSPSIG00000004046 Pelodiscus sinensis ENSPSIG00000004046 N
ENSPSIG00000004058 Pelodiscus sinensis ENSPSIG00000004058 N
ENSPSIG00000004060 Pelodiscus sinensis ENSPSIG00000004060 N
ENSPSIG00000014816 Pelodiscus sinensis ENSPSIG00000014816 N
ENSSHAG00000014397 Sarcophilus harrisii ENSSHAG00000014397 I
ENSSHAG00000014651 Sarcophilus harrisii ENSSHAG00000014651 N
ENSTGUG00000002875 Taeniopygia guttata ENSTGUG00000002875 N
ENSTGUG00000002877 Taeniopygia guttata ENSTGUG00000002877 N
ENSTGUG00000016560 Taeniopygia guttata ENSTGUG00000016560 N
Gfo_R009738 Geospiza fortis Gfo_R009738 N
Gfo_R009739 Geospiza fortis Gfo_R009739 N
her12 Danio rerio ENSDARG00000032963 N
HES5 Monodelphis domestica ENSMODG00000008212 I
HES5 Meleagris gallopavo ENSMGAG00000002009 I
HES5 Gallus gallus ENSGALG00000001141 I
hes8 Xenopus tropicalis XB-GENE-5952810 N
Pvit_15590 Pogona vitticeps Pvit_15590 N
Tal_R007853 Tyto alba Tal_R007853 N
Tal_R007854 Tyto alba Tal_R007854 N
Tal_R007855 Tyto alba Tal_R007855 I