IGS.gm_10_00281 (Chlorella NC64A)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 IGS.gm_10_00281 T071183_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GBF1
M01783_2.00 		Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD		 PBM
Weirauch et al.(2014)
pTH7259 		0.791 0.547
GBF1
M09913_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_01 		0.791 0.547
GBF1
M09914_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1F_Q2 		0.791 0.547
GBF1
M09915_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2_01 		0.791 0.547
GBF1
M09916_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GBF1_Q2 		0.791 0.547
BZIP16
M06764_2.00 		Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a 		0.783 0.547
BZIP16
M06765_2.00 		Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH		 Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a 		0.783 0.547
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
IGS.gm_10_00281 bZIP 147 210

Links

Other bZIP family TFs
Other Chlorella NC64A TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29646.m001068 Ricinus communis 29646.m001068 I 0.782
Bo1g005460 Brassica oleracea Bo1g005460 I 0.787
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I 0.783
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I 0.791
Bra010572 Brassica rapa Bra010572 I 0.787
Bra011701 Brassica rapa Bra011701 I 0.787
BZIP16 Arabidopsis thaliana AT2G35530 D 0.783
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I 0.788
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I 0.791
Carubv10005287m.g Capsella rubella Carubv10005287m.g I 0.791
cassava45491.m1 Manihot esculenta cassava45491.m1 I 0.782
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I 0.793
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I 0.782
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I 0.783
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I 0.790
fgeneshCV_pg.C_scaffold_12000127 Chlorella vulgaris fgeneshCV_pg.C_scaffold_12000127 I 0.807
GBF1 Vitis vinifera VIT_04s0023g01360 I 0.789
GBF1 Arabidopsis lyrata scaffold_700433.1 I 0.791
GBF1 Arabidopsis thaliana AT4G36730 D 0.791
Genemark1.5055_g Coccomyxa subellipsoidea C169 Genemark1.5055_g I 0.807
GLYMA02G06550 Glycine max GLYMA02G06550 I 0.786
GLYMA08G34280 Glycine max GLYMA08G34280 I 0.783
GLYMA16G15810 Glycine max GLYMA16G15810 I 0.783
GLYMA16G25600 Glycine max GLYMA16G25600 I 0.786
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I 0.792
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I 0.804
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I 0.799
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I 0.797
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I 0.797
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I 0.797
gw1.8.536.1 Micromonas pusilla gw1.8.536.1 I 0.799
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I 0.796
MDP0000231274 Malus domestica MDP0000231274 I 0.789
MTR_8g077950 Medicago truncatula MTR_8g077950 I 0.786
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I 0.793
PDK_20s1348391g002 Phoenix dactylifera PDK_20s1348391g002 I 0.791
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I 0.782
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I 0.789
Pm026586 Prunus mume Pm026586 I 0.793
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I 0.786
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I 0.786
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I 0.793
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I 0.786
SELMODRAFT_38592 Selaginella moellendorffii SELMODRAFT_38592 I 0.790
SELMODRAFT_38594 Selaginella moellendorffii SELMODRAFT_38594 I 0.790
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I 0.785
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I 0.789
TCM_000436 Theobroma cacao TCM_000436 I 0.803
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I 0.795
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I 0.787