CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.13129s0288
(
Boechera stricta
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Bostr.13129s0288
T071404_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA10
M06783_2.00
Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN
Dap-seq
OMalley et al.(2016)
TGA10_col_a
0.806
1.000
TGA10
M06784_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA10_colamp_a
0.806
1.000
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.13129s0288.1.p
bZIP
159
208
SDPKTLRRLAQNREAARKSRLRKKAYVQQLESCRIKLTQLEQEIQRARSQ
Bostr.13129s0288.2.p
bZIP
158
207
SDPKTLRRLAQNREAARKSRLRKKAYVQQLESCRIKLTQLEQEIQRARSQ
Links
Other
bZIP
family TFs
Other
Boechera stricta
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pc13g09440
Penicillium chrysogenum
Pc13g09440
N
0.000
Pc22g26920
Penicillium chrysogenum
Pc22g26920
N
0.000
PCH_Pc13g09440
Penicillium rubens
PCH_Pc13g09440
N
0.000
PDIP_29870
Penicillium digitatum
PDIP_29870
N
0.000
PEX1_090640
Penicillium expansum
PEX1_090640
N
0.000
PITC_062050
Penicillium italicum
PITC_062050
N
0.000
U727_0043332041
Penicillium solitum
U727_0043332041
N
0.000