CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.7365s0064
(
Boechera stricta
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Bostr.7365s0064
T071452_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GBF2
M01781_2.00
Arabidopsis thaliana
BMCASSNNN
NNNSSTGKV
PBM
Weirauch et al.(2014)
pTH7258
0.866
0.922
Q40645_ORYSA
M10050_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OSBZ8_Q6
0.855
0.703
Q41109_PHAVU
M10078_2.00
Phaseolus vulgaris
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ROM_Q2
0.853
0.672
PK09653.1
M01156_2.00
Cannabis sativa
NNMCASVNNN
NNNBSTGKNN
PBM
Lambert et al.(2019)
pTH10114
0.850
0.656
TAF1_TOBAC
M10079_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_01
0.837
0.703
TAF1_TOBAC
M10080_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAF1_Q2
0.837
0.703
GBF3
M01779_2.00
Arabidopsis thaliana
NBMCASSTVD
HBASSTGKVN
PBM
Weirauch et al.(2014)
pTH7328
0.832
0.734
GBF3
M06770_2.00
Arabidopsis thaliana
DNHDNHSACGTGKMD
HKMCACGTSDNHDNH
Dap-seq
OMalley et al.(2016)
GBF3_colamp
0.832
0.734
GBF3
M06771_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
GBF3_col
0.832
0.734
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.808
0.594
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.808
0.594
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.808
0.594
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.808
0.594
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.808
0.594
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.787
0.531
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.787
0.531
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.786
0.547
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.786
0.547
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.786
0.609
CPRF3_PETCR
M10071_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_01
0.785
0.484
CPRF3_PETCR
M10072_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF3_Q2
0.785
0.484
CPRF1_PETCR
M10066_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_01
0.784
0.609
CPRF1_PETCR
M10067_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF1_Q2
0.784
0.609
CPRF1_PETCR
M10068_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CPRF_Q2
0.784
0.609
EmBP-1
M02659_2.00
Triticum aestivum
CCACGTSW
WSACGTGG
SELEX
Mathelier et al.(2014)
MA0128.1
0.783
0.609
EMBP1_WHEAT
M09921_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_02
0.783
0.609
EMBP1_WHEAT
M09922_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$EMBP1_Q2
0.783
0.609
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.7365s0064.1.p
bZIP
245
308
EKEVKREKRKQSNRESARRSRLRKQAETEQLAVKVDALVAENMTLRSKVSQLNDESEKLRLENE
Links
Other
bZIP
family TFs
Other
Boechera stricta
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_189729
Agaricus bisporus
AGABI2DRAFT_189729
N
BBA_01545
Beauveria bassiana
BBA_01545
N
CG34422
Drosophila melanogaster
FBgn0085451
N
COCC4DRAFT_204146
Bipolaris maydis
COCC4DRAFT_204146
N
COCCADRAFT_91234
Bipolaris zeicola
COCCADRAFT_91234
N
COCMIDRAFT_4549
Bipolaris oryzae
COCMIDRAFT_4549
N
COCSADRAFT_277515
Bipolaris sorokiniana
COCSADRAFT_277515
N
COCVIDRAFT_107914
Bipolaris victoriae
COCVIDRAFT_107914
N
CY34DRAFT_799479
Suillus luteus
CY34DRAFT_799479
N
estExt_fgenesh1_pg.C_260064
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_260064
N
GA20228
Drosophila pseudoobscura
FBgn0080223
N
GD17413
Drosophila simulans
FBgn0188968
N
GE17754
Drosophila yakuba
FBgn0235199
N
GF19054
Drosophila ananassae
FBgn0096066
N
GG19191
Drosophila erecta
FBgn0111397
N
GH17861
Drosophila grimshawi
FBgn0125330
N
GI21731
Drosophila mojavensis
FBgn0144461
N
GJ19112
Drosophila virilis
FBgn0206257
N
GK19784
Drosophila willistoni
FBgn0221782
N
GLOTRDRAFT_118924
Gloeophyllum trabeum
GLOTRDRAFT_118924
N
GM18724
Drosophila sechellia
FBgn0173629
N
LACBIDRAFT_300797
Laccaria bicolor
LACBIDRAFT_300797
N
M404DRAFT_656711
Pisolithus tinctorius
M404DRAFT_656711
N
M413DRAFT_219877
Hebeloma cylindrosporum
M413DRAFT_219877
N
Moror_92
Moniliophthora roreri
Moror_92
N
PISMIDRAFT_589784
Pisolithus microcarpus
PISMIDRAFT_589784
N
PTRG_03338
Pyrenophora triticirepentis
PTRG_03338
N
SETTUDRAFT_183195
Setosphaeria turcica
SETTUDRAFT_183195
N