Cagra.1671s0236 (Capsella grandiflora)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cagra.1671s0236 T071498_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20942.1
M01159_2.00 		Cannabis sativa
NNNNDAMAKCTRN
NYAGMTKTHNNNN		 PBM
Lambert et al.(2019)
pTH11276 		0.900 0.935
AT1G06070
M06744_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_col_a 		0.895 0.968
AT1G06070
M06745_2.00 		Arabidopsis thaliana
TGMCAGCTGKM
KMCAGCTGKCA		 Dap-seq
OMalley et al.(2016)
bZIP69_colamp_a 		0.895 0.968
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1671s0236.1.p bZIP 209 270
Cagra.1671s0236.2.p bZIP 209 270

Links

Other bZIP family TFs
Other Capsella grandiflora TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GF14488 Drosophila ananassae FBgn0091515 N
GM17063 Drosophila sechellia FBgn0171975 N
ham Drosophila melanogaster FBgn0045852 N