CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDK_20s1568831g001
(
Phoenix dactylifera
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
PDK_20s1568831g001
T073521_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK23964.1
M01160_2.00
Cannabis sativa
DNKMCACGTV
BACGTGKMNH
PBM
Lambert et al.(2019)
pTH10151
0.855
0.766
BZIP68
M01770_2.00
Arabidopsis thaliana
BMCASGBND
HNVCSTGKV
PBM
Weirauch et al.(2014)
pTH8192
0.846
0.703
BZIP68
M06752_2.00
Arabidopsis thaliana
DNWKNHSACGTGGCR
YGCCACGTSDNMWNH
Dap-seq
OMalley et al.(2016)
bZIP68_col_a
0.846
0.703
GBF1
M01783_2.00
Arabidopsis thaliana
HBACGTGKMN
NKMCACGTVD
PBM
Weirauch et al.(2014)
pTH7259
0.815
0.625
GBF1
M09913_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_01
0.815
0.625
GBF1
M09914_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1F_Q2
0.815
0.625
GBF1
M09915_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2_01
0.815
0.625
GBF1
M09916_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GBF1_Q2
0.815
0.625
BZIP16
M06764_2.00
Arabidopsis thaliana
DDWKVYSACGTGGCA
TGCCACGTSRBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_colamp_a
0.813
0.688
BZIP16
M06765_2.00
Arabidopsis thaliana
DDWKVHSACGTGGCA
TGCCACGTSDBMWHH
Dap-seq
OMalley et al.(2016)
bZIP16_col_v3a
0.813
0.688
HBP1A_WHEAT
M10041_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBP1A_Q2
0.808
0.734
HBP1A_WHEAT
M10042_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HBPA1_Q6_01
0.808
0.734
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1568831g001
bZIP
257
320
ERELKRQRRKQSNRESARRSRLRKQAECEELARRVDALKEENTCLRAEVDRIKKDYEQLLAQNA
Links
Other
bZIP
family TFs
Other
Phoenix dactylifera
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GPUH_0001439101
Gongylonema pulchrum
GPUH_0001439101
N
L889_g18776
Steinernema feltiae
L889_g18776
N
PGUG_00551
Candida guilliermondii
PGUG_00551
N
VDBG_09577
Verticillium albo atrum
VDBG_09577
N
VDBG_09577
Verticillium alfalfae
VDBG_09577
N