CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_04025
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_04025
T077282_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07952
M01890_2.00
Neurospora crassa
YWNMGCCHY
RDGGCKNWR
PBM
Weirauch et al.(2014)
pTH9003
0.784
0.897
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_04025T0
C2H2 ZF
532
554
FQCNLCPKRFTRAYNLRSHLRTH
CIMG_04025T0
C2H2 ZF
560
582
FVCTVCGKAFARQHDRKRHEGLH
CIMG_04025T0
C2H2 ZF
588
618
FVCRGDLTRGGQWGCGRRFARADALGRHFRS
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action