CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_04796
(
Coccidioides immitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CIMG_04796
T077284_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.776
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_04796T0
C2H2 ZF
362
387
FKCEYPGCNSEPFQTQYLLNSHANVH
CIMG_04796T0
C2H2 ZF
393
422
YHCPVEDCPRGKGGTGFKRKNEMKRHALVH
CIMG_04796T0
C2H2 ZF
427
453
YICPFCSDQQRQYPRPDNLQRHVRAQH
Links
Other
C2H2 ZF
family TFs
Other
Coccidioides immitis
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FPSE_02393
Fusarium pseudograminearum
FPSE_02393
N