RO3G_07016 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_07016 T078186_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_07016
M01436_2.00		 Rhizopus oryzae
NNCYCCYNN
NNRGGRGNN		 PBM
Najafabadi et al.(2015a)
pTH10224		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01436_2.00 C2H2 ZF 51 76
M01436_2.00 C2H2 ZF 82 106

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_07015 C2H2 ZF 138 163
RO3T_07015 C2H2 ZF 169 193

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R014934 Calypte anna Aan_R014934 N
Afo_R006068 Aptenodytes forsteri Afo_R006068 N
Alligator_sinensis_CCG003358.1 Alligator sinensis Alligator_sinensis_CCG003358.1 N
Cmyd_10014647 Chelonia mydas Cmyd_10014647 N
ENSAMXG00000004878 Astyanax mexicanus ENSAMXG00000004878 N
ENSEEUG00000012976 Erinaceus europaeus ENSEEUG00000012976 N
ENSFALG00000012636 Ficedula albicollis ENSFALG00000012636 N
ENSGALG00000016087 Gallus gallus ENSGALG00000016087 N
ENSGMOG00000017980 Gadus morhua ENSGMOG00000017980 N
ENSLACG00000014652 Latimeria chalumnae ENSLACG00000014652 N
ENSLOCG00000002435 Lepisosteus oculatus ENSLOCG00000002435 N
ENSLOCG00000006834 Lepisosteus oculatus ENSLOCG00000006834 N
ENSMPUG00000007635 Mustela putorius furo ENSMPUG00000007635 N
ENSOARG00000011843 Ovis aries ENSOARG00000011843 N
ENSONIG00000017557 Oreochromis niloticus ENSONIG00000017557 N
ENSPFOG00000011684 Poecilia formosa ENSPFOG00000011684 N
ENSPPYG00000012296 Pongo abelii ENSPPYG00000012296 N
ENSPSIG00000002615 Pelodiscus sinensis ENSPSIG00000002615 N
ENSXMAG00000005499 Xiphophorus maculatus ENSXMAG00000005499 N
FBXO41 Sorex araneus ENSSARG00000011507 N
fbxo41 Xenopus tropicalis XB-GENE-966908 N
fbxo41 Danio rerio ENSDARG00000078908 N
FBXO41 Felis catus ENSFCAG00000009398 N
fbxo41 Gasterosteus aculeatus ENSGACG00000017614 N
fbxo41 Takifugu rubripes ENSTRUG00000001696 N
fbxo41 Tetraodon nigroviridis ENSTNIG00000018046 N
FBXO41 Taeniopygia guttata ENSTGUG00000015356 N
FBXO41 Monodelphis domestica ENSMODG00000016969 N
Fbxo41 Rattus norvegicus ENSRNOG00000033202 N
fbxo41 Oryzias latipes ENSORLG00000006366 N
FBXO41 Anolis carolinensis ENSACAG00000000364 N
FBXO41 Oryctolagus cuniculus ENSOCUG00000002433 N
FBXO41 Meleagris gallopavo ENSMGAG00000013309 N
Fbxo41 Mus musculus ENSMUSG00000047013 N
Ogr04473 Ophisaurus gracilis Ogr04473 N
Ogr08674 Ophisaurus gracilis Ogr08674 N
ZNF365 Sorex araneus ENSSARG00000009027 N
ZNF365 Homo sapiens ENSG00000138311 N