CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_11249
(
Rhizopus oryzae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RO3G_11249
T078203_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_11248
C2H2 ZF
124
146
YVCQLCSKRFTRPSSLTTHIYSH
RO3T_11248
C2H2 ZF
152
176
FKCPVGDCGRQFSVVSNLRRHAKIH
Links
Other
C2H2 ZF
family TFs
Other
Rhizopus oryzae
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_pg.C_20023
Mucor circinelloides
estExt_fgeneshMC_pg.C_20023
N
0.757
estExt_fgeneshPB_pg.C_10669
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_10669
N
0.757
estExt_fgeneshPB_pg.C_130275
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_130275
I
0.766
fgeneshMC_pg.5_#_104
Mucor circinelloides
fgeneshMC_pg.5_#_104
N
0.786
GLOINDRAFT_335196
Rhizophagus irregularis
GLOINDRAFT_335196
I
0.766
GLOINDRAFT_349090
Rhizophagus irregularis
GLOINDRAFT_349090
I
0.766
YALI0_B00660g
Yarrowia lipolytica
YALI0_B00660g
I
0.761