CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_07635
(
Verticillium albo atrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
VDBG_07635
T078401_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_07635T0
C2H2 ZF
54
78
FSCSFPGCDKLYSRAEHLHRHQLNH
VDBG_07635T0
C2H2 ZF
84
108
FRCEEPGCDQKFVRADLLARHKKRH
Links
Other
C2H2 ZF
family TFs
Other
Verticillium albo atrum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BAUCODRAFT_75584
Baudoinia compniacensis
BAUCODRAFT_75584
N
0.756
DOTSEDRAFT_75761
Dothistroma septosporum
DOTSEDRAFT_75761
N
0.756
PODANS_2_7560
Podospora anserina
PODANS_2_7560
I
0.797
VDAG_09357
Verticillium dahliae
VDAG_09357
N
0.827
VDBG_07635
Verticillium alfalfae
VDBG_07635
N
0.827