CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ADAC007677
(
Anopheles darlingi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ADAC007677
T080251_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu
M03680_2.00
Drosophila melanogaster
HCCRCCCACGCAH
DTGCGTGGGYGGD
SELEX
Nitta et al.(2015)
klu_1
0.771
0.902
klu
M03681_2.00
Drosophila melanogaster
YMCGCCCMCGCAH
DTGCGKGGGCGKR
SELEX
Nitta et al.(2015)
klu_2
0.771
0.902
klu
M06114_2.00
Drosophila melanogaster
MCACCCMCRCA
TGYGKGGGTGK
B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469
0.771
0.902
klu
M06115_2.00
Drosophila melanogaster
NNNNMCACCCMCRCN
NGYGKGGGTGKNNNN
B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469
0.771
0.902
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ADAC007677-PA
C2H2 ZF
600
623
YMCPVCGQLFSLQDRLAKHMASRH
ADAC007677-PA
C2H2 ZF
636
658
YMCEVCHRSFARSDMLTRHMRLH
ADAC007677-PA
C2H2 ZF
664
686
YSCKVCGQIFSRSDHLSTHQRTH
ADAC007677-PA
C2H2 ZF
692
714
YKCPQCPYAACRRDMITRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Anopheles darlingi
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC233880.1_FG006
Zea mays
AC233880.1_FG006
N
BGIOSGA002005
Oryza indica
BGIOSGA002005
N
BRADI2G08600
Brachypodium distachyon
BRADI2G08600
N
F775_29714
Aegilops tauschii
F775_29714
N
GSMUA_Achr10G15240_001
Musa acuminata
GSMUA_Achr10G15240_001
N
LPERR01G08830
Leersia perrieri
LPERR01G08830
N
OB01G19360
Oryza brachyantha
OB01G19360
N
OBART01G09250
Oryza barthii
OBART01G09250
N
OGLUM01G10590
Oryza glumaepatula
OGLUM01G10590
N
OMERI01G09230
Oryza meridionalis
OMERI01G09230
N
ONIVA01G11810
Oryza nivara
ONIVA01G11810
N
OPUNC01G09100
Oryza punctata
OPUNC01G09100
N
ORGLA01G0083700
Oryza glaberrima
ORGLA01G0083700
N
ORUFI01G10030
Oryza rufipogon
ORUFI01G10030
N
OS01G0246500
Oryza sativa
OS01G0246500
N
Pavir.J24144
Panicum virgatum
Pavir.J24144
N
Sb03g000260
Sorghum bicolor
Sb03g000260
N
Si002505m.g
Setaria italica
Si002505m.g
N
Si036653m.g
Setaria italica
Si036653m.g
N
TRAES3BF003800040CFD_g
Triticum aestivum
TRAES3BF003800040CFD_g
N
Traes_3AS_D1FC86E9B
Triticum aestivum
Traes_3AS_D1FC86E9B
N