CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AOL_s00004g467
(
Arthrobotrys oligospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AOL_s00004g467
T080700_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.816
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGX53808
C2H2 ZF
19
41
YKCAYCARAFSRSEHRSRHERSH
EGX53808
C2H2 ZF
47
70
FKCLKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Arthrobotrys oligospora
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action