CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA011447
(
Oryza indica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BGIOSGA011447
T081513_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA011447-PA
C2H2 ZF
540
563
FQCEIDYCRMTFKNRAELSVHKKN
BGIOSGA011447-PA
C2H2 ZF
564
587
TCTVKSCGRHFRSHKYLRRHQSIH
BGIOSGA011447-PA
C2H2 ZF
623
646
YKCTTPGCSKIYKFVSDFTRHKRR
Links
Other
C2H2 ZF
family TFs
Other
Oryza indica
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011665
Oryza indica
BGIOSGA011665
N
LPERR03G00340
Leersia perrieri
LPERR03G00340
N
OB03G10360
Oryza brachyantha
OB03G10360
N
OBART03G00350
Oryza barthii
OBART03G00350
N
OGLUM03G00280
Oryza glumaepatula
OGLUM03G00280
N
OLONG_014518
Oryza longistaminata
OLONG_014518
N
OMERI09G03330
Oryza meridionalis
OMERI09G03330
N
ONIVA03G00860
Oryza nivara
ONIVA03G00860
N
OPUNC03G00300
Oryza punctata
OPUNC03G00300
N
ORUFI03G00330
Oryza rufipogon
ORUFI03G00330
N
OS03G0103400
Oryza sativa
OS03G0103400
N