CCM_04022 (Cordyceps militaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CCM_04022 T083174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
cre-1
M01198_2.00 		Neurospora crassa
CCCCRNNN
NNNYGGGG		 PBM
Lambert et al.(2019)
pTH8711 		0.827 1.000
RO3G_16591
M01442_2.00 		Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN		 PBM
Najafabadi et al.(2015a)
pTH10231 		0.792 0.826
MIG1
M00026_2.00 		Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD		 PBM
Badis et al.(2008)
MIG1_2106 		0.781 0.761
MIG1
M01532_2.00 		Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN		 PBM
Zhu et al.(2009)
Mig1 		0.781 0.761
MIG1
M07456_2.00 		Saccharomyces cerevisiae
NCCCCRS
SYGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1 		0.781 0.761
MIG1
M08523_2.00 		Saccharomyces cerevisiae
NCCCCRS
SYGGGGN		 Misc
DeBoer et al.(2011)
YGL035C_555 		0.781 0.761
MIG1
M08524_2.00 		Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG		 Misc
DeBoer et al.(2011)
YGL035C_654 		0.781 0.761
MIG1
M10391_2.00 		Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN		 Transfac
Matys et al.(2006)
F$MIG1_01 		0.781 0.761
MIG1
M10392_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MIG1_03 		0.781 0.761
MIG1
M10393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MIG1_Q6 		0.781 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGX92649 C2H2 ZF 70 92
EGX92649 C2H2 ZF 98 122

Links

Other C2H2 ZF family TFs
Other Cordyceps militaris TFs

287 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla021437 Citrullus lanatus Cla021437 I
Cucsa.259560 Cucumis sativus Cucsa.259560 I
Eucgr.D02645 Eucalyptus grandis Eucgr.D02645 I
Eucgr.I02464 Eucalyptus grandis Eucgr.I02464 I
F775_30991 Aegilops tauschii F775_30991 I
GSMUA_Achr1G16280_001 Musa acuminata GSMUA_Achr1G16280_001 I
GSMUA_Achr1G18670_001 Musa acuminata GSMUA_Achr1G18670_001 I
HOX6 Oryza sativa OS09G0528200 D
LPERR09G05860 Leersia perrieri LPERR09G05860 I
LPERR09G13180 Leersia perrieri LPERR09G13180 I
MLOC_69710 Hordeum vulgare MLOC_69710 I
OB09G23870 Oryza brachyantha OB09G23870 I
OBART02G26000 Oryza barthii OBART02G26000 I
OLONG_017897 Oryza longistaminata OLONG_017897 I
OMERI09G12780 Oryza meridionalis OMERI09G12780 I
OS04G0541700 Oryza sativa OS04G0541700 I
Pavir.J33909 Panicum virgatum Pavir.J33909 I
Pavir.J34132 Panicum virgatum Pavir.J34132 I
SapurV1A.0617s0090 Salix purpurea SapurV1A.0617s0090 I
SapurV1A.2485s0010 Salix purpurea SapurV1A.2485s0010 I
Traes_2AL_BFB0C6D4C Triticum aestivum Traes_2AL_BFB0C6D4C I
Traes_5BL_9C32B27E2 Triticum aestivum Traes_5BL_9C32B27E2 I
Traes_5DL_96F9EED93 Triticum aestivum Traes_5DL_96F9EED93 I
TRIUR3_11780 Triticum urartu TRIUR3_11780 I
TRIUR3_22395 Triticum urartu TRIUR3_22395 I