CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CFIO01_12195
(
Colletotrichum fioriniae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CFIO01_12195
T083313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.822
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXF86286
C2H2 ZF
30
52
YKCQFCNRAFSRSEHRSRHERSH
EXF86286
C2H2 ZF
58
81
FKCMKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Colletotrichum fioriniae
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_122900
Albugo laibachii
ALNC14_122900
N
0.000
RHTO_02432
Rhodosporidium toruloides
RHTO_02432
N
0.000
RHTO_06941
Rhodosporidium toruloides
RHTO_06941
N
0.000
RHTO_07521
Rhodosporidium toruloides
RHTO_07521
N
0.000