CRE01013 (Caenorhabditis remanei)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CRE01013 T084961_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-29
M00635_2.00 		Caenorhabditis elegans
NNGCTTNWNN
NNWNAAGCNN		 PBM
Narasimhan et al.(2015)
pTH10041 		0.804 0.955
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE01013 C2H2 ZF 18 41
CRE01013 C2H2 ZF 46 68
CRE01013 C2H2 ZF 74 95

Links

Other C2H2 ZF family TFs
Other Caenorhabditis remanei TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AUEXF2481DRAFT_53931 Aureobasidium subglaciale AUEXF2481DRAFT_53931 N
BAUCODRAFT_143812 Baudoinia compniacensis BAUCODRAFT_143812 N
DOTSEDRAFT_56838 Dothistroma septosporum DOTSEDRAFT_56838 N
estExt_Genewise1Plus.C_chr_70001 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70001 N
fgenesh1_pg.C_scaffold_3000340 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_3000340 N
M437DRAFT_20648 Aureobasidium melanogenum M437DRAFT_20648 N
M438DRAFT_346183 Aureobasidium pullulans M438DRAFT_346183 N
PABG_06528 Paracoccidioides brasiliensis PABG_06528 N