ENSAMEG00000016174 (Ailuropoda melanoleuca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMEG00000016174 T086943_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.827 1.000
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.827 1.000
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000017084 C2H2 ZF 591 613
ENSAMEP00000017084 C2H2 ZF 619 641
ENSAMEP00000017084 C2H2 ZF 647 669
ENSAMEP00000017084 C2H2 ZF 675 697
ENSAMEP00000017084 C2H2 ZF 703 725
ENSAMEP00000017084 C2H2 ZF 731 752

Links

Other C2H2 ZF family TFs
Other Ailuropoda melanoleuca TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASU_07704 Ascaris suum ASU_07704 N 0.000
Bm1894 Brugia malayi Bm1894 N 0.000
BTMF_0001408601 Brugia timori BTMF_0001408601 N 0.000
DME_0000426101 Dracunculus medinensis DME_0000426101 N 0.000
EEL_0000930001 Elaeophora elaphi EEL_0000930001 N 0.000
EVEC_0001019201 Enterobius vermicularis EVEC_0001019201 N 0.000
LOAG_10033 Loa loa LOAG_10033 N 0.000
nDi.2.2.2.g04749 Dirofilaria immitis nDi.2.2.2.g04749 N 0.000
nLs.2.1.2.g06426 Litomosoides sigmodontis nLs.2.1.2.g06426 N 0.000
nOo.2.0.1.g08128 Onchocerca ochengi nOo.2.0.1.g08128 N 0.000
SMUV_0000583701 Syphacia muris SMUV_0000583701 N 0.000
TCNE_0001749201 Toxocara canis TCNE_0001749201 N 0.000
WBGene00246733 Onchocerca volvulus WBGene00246733 N 0.000
WUBG_07288 Wuchereria bancrofti WUBG_07288 N 0.000