CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OVOL1
(
Bos taurus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSBTAG00000012656
T087866_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ovol1
M08974_2.00
Mus musculus
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_MOUSE.H11MO.0.C
0.826
0.971
OVOL1
M04556_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_HT-SELEX
0.820
0.971
OVOL1
M08919_2.00
Homo sapiens
WCMGTTACM
KGTAACKGW
Misc
Kulakovskiy et al.(2013)
OVOL1_HUMAN.H11MO.0.C
0.820
0.971
OVOL1
M04557_2.00
Homo sapiens
NDDACCGTTAYNYN
NRNRTAACGGTHHN
SELEX
Yin et al.(2017)
OVOL1_FL_Methyl-HT-SELEX
0.820
0.971
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000016791
C2H2 ZF
118
140
FTCHICQKAFTYQRMLNRHMKCH
ENSBTAP00000016791
C2H2 ZF
146
168
HLCTYCGKGFNDTFDLKRHVRTH
ENSBTAP00000016791
C2H2 ZF
174
197
YKCSLCDKAFTQRCSLESHLKKIH
Links
Other
C2H2 ZF
family TFs
Other
Bos taurus
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.9453
Candida albicans
CaO19.9453
I
CD36_21640
Candida dubliniensis
CD36_21640
I
CLUG_04121
Candida lusitaniae
CLUG_04121
I
CLUG_04121
Clavispora lusitaniae
CLUG_04121
I
CORT_0B06240
Candida orthopsilosis
CORT_0B06240
I
CPAG_03671
Candida parapsilosis
CPAG_03671
I
CTRG_01721
Candida tropicalis
CTRG_01721
I
DEHA2C08008g
Debaryomyces hansenii
DEHA2C08008g
I
e_gww1.4.1.1444.1
Pichia stipitis
e_gww1.4.1.1444.1
I
G210_2482
Candida maltosa
G210_2482
I
GNLVRS01_PISO0E13490g
Millerozyma farinosa
GNLVRS01_PISO0E13490g
I
GNLVRS01_PISO0F14877g
Millerozyma farinosa
GNLVRS01_PISO0F14877g
I
PGUG_04142
Candida guilliermondii
PGUG_04142
I
PGUG_04142
Meyerozyma guilliermondii
PGUG_04142
I
PICST_59036
Scheffersomyces stipitis
PICST_59036
I
SPAPADRAFT_137813
Spathaspora passalidarum
SPAPADRAFT_137813
I