ZSCAN23 (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000037965 T088074_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZSCAN23
M04613_2.00 		Homo sapiens
NYCATGTGCTAATTACAVN
NBTGTAATTAGCACATGRN		 SELEX
Yin et al.(2017)
ZSCAN23_eDBD_HT-SELEX 		0.793 0.939
ZSCAN23
M04614_2.00 		Homo sapiens
NYCATGTGCTAATTACRHN
NDYGTAATTAGCACATGRN		 SELEX
Yin et al.(2017)
ZSCAN23_eDBD_Methyl-HT-SELEX 		0.793 0.939
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000052434 C2H2 ZF 297 319
ENSBTAP00000052434 C2H2 ZF 325 347
ENSBTAP00000052434 C2H2 ZF 353 375
ENSBTAP00000052434 C2H2 ZF 381 403
ENSBTAP00000052434 C2H2 ZF 409 431

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC177924.2_FG001 Zea mays AC177924.2_FG001 N
BGIOSGA009202 Oryza indica BGIOSGA009202 N
Bo9g001070 Brassica oleracea Bo9g001070 N
Cagra.2428s0008 Capsella grandiflora Cagra.2428s0008 N
Cucsa.140430 Cucumis sativus Cucsa.140430 N
F775_14547 Aegilops tauschii F775_14547 N
F775_20324 Aegilops tauschii F775_20324 N
GLYMA14G09231 Glycine max GLYMA14G09231 I
GLYMA17G21573 Glycine max GLYMA17G21573 I
GRMZM2G316758 Zea mays GRMZM2G316758 N
GSMUA_Achr9G11300_001 Musa acuminata GSMUA_Achr9G11300_001 N
Lus10018724.g Linum usitatissimum Lus10018724.g N
Lus10036286.g Linum usitatissimum Lus10036286.g N
mgf017216m Mimulus guttatus mgf017216m N
mgf025738m Mimulus guttatus mgf025738m N
OB02G42630 Oryza brachyantha OB02G42630 N
OB12G25120 Oryza brachyantha OB12G25120 N
OBART02G35840 Oryza barthii OBART02G35840 N
OGLUM03G27730 Oryza glumaepatula OGLUM03G27730 I
OGLUM05G02640 Oryza glumaepatula OGLUM05G02640 I
OLONG_003839 Oryza longistaminata OLONG_003839 N
OLONG_008235 Oryza longistaminata OLONG_008235 N
OLONG_013198 Oryza longistaminata OLONG_013198 I
OMERI05G02570 Oryza meridionalis OMERI05G02570 I
ONIVA10G20730 Oryza nivara ONIVA10G20730 N
OPUNC01G09800 Oryza punctata OPUNC01G09800 N
OPUNC06G04110 Oryza punctata OPUNC06G04110 N
OPUNC09G08950 Oryza punctata OPUNC09G08950 N
ORGLA05G0025000 Oryza glaberrima ORGLA05G0025000 N
ORUFI10G19390 Oryza rufipogon ORUFI10G19390 N
Pavir.Ca01237 Panicum virgatum Pavir.Ca01237 I
Pavir.J12143 Panicum virgatum Pavir.J12143 I
PDK_20s1361701g002 Phoenix dactylifera PDK_20s1361701g002 N
Pm005303 Prunus mume Pm005303 N
Traes_6AS_E0A257EEA Triticum aestivum Traes_6AS_E0A257EEA N
TRIUR3_21181 Triticum urartu TRIUR3_21181 N
TRIUR3_25332 Triticum urartu TRIUR3_25332 N
TRIUR3_26354 Triticum urartu TRIUR3_26354 N
TRIUR3_33471 Triticum urartu TRIUR3_33471 N