PRDM6 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000023666 T088468_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.827 1.000
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000031903 C2H2 ZF 396 417
ENSCAFP00000031903 C2H2 ZF 424 446
ENSCAFP00000031903 C2H2 ZF 452 474
ENSCAFP00000031903 C2H2 ZF 480 501

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000753701 Angiostrongylus cantonensis ACAC_0000753701 N 0.000
ACOC_0000723101 Angiostrongylus costaricensis ACOC_0000723101 N 0.000
ALUE_0000597001 Ascaris lumbricoides ALUE_0000597001 N 0.000
ANCCAN_23934 Ancylostoma caninum ANCCAN_23934 N 0.000
ANCCEY_04025 Ancylostoma ceylanicum ANCCEY_04025 N 0.000
ASIM_0001035401 Anisakis simplex ASIM_0001035401 N 0.000
ASU_05070 Ascaris suum ASU_05070 N 0.000
Bm4127 Brugia malayi Bm4127 N 0.000
Brh_R008554 Buceros rhinoceros Brh_R008554 N 0.000
CBG02192 Caenorhabditis briggsae CBG02192 N 0.000
CBN28626 Caenorhabditis brenneri CBN28626 N 0.000
CJA08234 Caenorhabditis japonica CJA08234 N 0.000
CRE29852 Caenorhabditis remanei CRE29852 N 0.000
DICVIV_02118 Dictyocaulus viviparus DICVIV_02118 N 0.000
ENSFALG00000014565 Ficedula albicollis ENSFALG00000014565 N 0.000
ENSGALG00000028383 Gallus gallus ENSGALG00000028383 N 0.000
ENSSHAG00000001834 Sarcophilus harrisii ENSSHAG00000001834 N 0.000
genemark-nMf.1.1.scaf02796-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf02796-processed-gene-0.1 N 0.000
HCOI00434500 Haemonchus contortus HCOI00434500 N 0.000
HCOI00964400 Haemonchus contortus HCOI00964400 N 0.000
HPBE_0002179101 Heligmosomoides bakeri HPBE_0002179101 N 0.000
HPLM_0002150501 Haemonchus placei HPLM_0002150501 N 0.000
KLF6 Homo sapiens ENSG00000067082 D 0.000
KLF6 Callithrix jacchus ENSCJAG00000032379 I 0.000
KLF6 Bos taurus ENSBTAG00000015188 N 0.000
L596_g774 Steinernema carpocapsae L596_g774 N 0.000
L889_g7152 Steinernema feltiae L889_g7152 N 0.000
L898_g8665 Steinernema monticolum L898_g8665 N 0.000
LOAG_16800 Loa loa LOAG_16800 N 0.000
MhA1_Contig50.frz3.gene11 Meloidogyne hapla MhA1_Contig50.frz3.gene11 N 0.000
Minc12575 Meloidogyne incognita Minc12575 N 0.000
Minc17725 Meloidogyne incognita Minc17725 N 0.000
Minc18316 Meloidogyne incognita Minc18316 N 0.000
NECAME_06295 Necator americanus NECAME_06295 N 0.000
nRc.2.0.1.g28453 Romanomermis culicivorax nRc.2.0.1.g28453 N 0.000
OESDEN_11868 Oesophagostomum dentatum OESDEN_11868 N 0.000
PEQ_0000869901 Parascaris equorum PEQ_0000869901 N 0.000
PTRK_0000626000 Parastrongyloides trichosuri PTRK_0000626000 N 0.000
RSKR_0000428100 Rhabditophanes kr3021 RSKR_0000428100 N 0.000
SCUD_0001868801 Schistosoma curassoni SCUD_0001868801 N 0.000
SNAPOd2T00005680001 Oikopleura dioica SNAPOd2T00005680001 N 0.000
SPAL_0000645700 Strongyloides papillosus SPAL_0000645700 N 0.000
sptf-1 Caenorhabditis elegans WBGene00009743 N 0.000
SSTP_0000770600 Strongyloides stercoralis SSTP_0000770600 N 0.000
SVE_1810500 Strongyloides venezuelensis SVE_1810500 N 0.000
WBGene00237705 Onchocerca volvulus WBGene00237705 N 0.000