CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN23
(
Choloepus hoffmanni
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCHOG00000004064
T088806_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN23
M04613_2.00
Homo sapiens
NYCATGTGCTAATTACAVN
NBTGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_HT-SELEX
0.807
0.948
ZSCAN23
M04614_2.00
Homo sapiens
NYCATGTGCTAATTACRHN
NDYGTAATTAGCACATGRN
SELEX
Yin et al.(2017)
ZSCAN23_eDBD_Methyl-HT-SELEX
0.807
0.948
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000003589
C2H2 ZF
248
270
YVCGECGKSFTQNSILIEHQRTH
ENSCHOP00000003589
C2H2 ZF
276
298
YECDECGRAFSQRSGLFQHQRLH
ENSCHOP00000003589
C2H2 ZF
304
326
YQCNVCGKAFSQNAGLFHHLRIH
ENSCHOP00000003589
C2H2 ZF
332
354
YQCSQCSKSFSRRSVLIKHQKIH
ENSCHOP00000003589
C2H2 ZF
360
382
YECEECGKNFIYHCNLIQHRKVH
Links
Other
C2H2 ZF
family TFs
Other
Choloepus hoffmanni
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy