CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCING00000000012
(
Ciona intestinalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCING00000000012
T089048_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCINP00000000015
C2H2 ZF
27
54
HTCYWEDCSRKRKGFKAKYKLVNHIRVH
ENSCINP00000000015
C2H2 ZF
60
84
FVCPFPDCGKTFGRSENLKIHHRTH
ENSCINP00000000015
C2H2 ZF
90
114
FPCKFPGCERRFANSSDRKKHSYMH
ENSCINP00000000015
C2H2 ZF
120
144
YACKYEGCDRSYTHPSSLRKHIRMH
Links
Other
C2H2 ZF
family TFs
Other
Ciona intestinalis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_00370
Ancylostoma ceylanicum
ANCCEY_00370
I
0.756
CGI_10016117
Crassostrea gigas
CGI_10016117
I
0.775
csin109208
Clonorchis sinensis
csin109208
I
0.768
ENSCING00000000010
Ciona intestinalis
ENSCING00000000010
N
0.827
ENSCING00000002517
Ciona intestinalis
ENSCING00000002517
N
0.827
ENSCING00000021681
Ciona intestinalis
ENSCING00000021681
N
0.815
ENSCING00000022318
Ciona intestinalis
ENSCING00000022318
N
0.807
ENSCSAVG00000002442
Ciona savignyi
ENSCSAVG00000002442
N
0.803
ENSCSAVG00000002450
Ciona savignyi
ENSCSAVG00000002450
N
0.803
ENSCSAVG00000002454
Ciona savignyi
ENSCSAVG00000002454
N
0.803
ENSCSAVG00000002459
Ciona savignyi
ENSCSAVG00000002459
N
0.798
ENSCSAVG00000002465
Ciona savignyi
ENSCSAVG00000002465
N
0.803
HelroG77001
Helobdella robusta
HelroG77001
N
0.772
Sakowv30026420m.g
Saccoglossus kowalevskii
Sakowv30026420m.g
I
0.763
SMU15031708
Schmidtea mediterranea
SMU15031708
I
0.771
SMU15033928
Schmidtea mediterranea
SMU15033928
I
0.768
SNAPOd2T00002718001
Oikopleura dioica
SNAPOd2T00002718001
I
0.762
T265_00048
Opisthorchis viverrini
T265_00048
I
0.768
tetur11g00650
Tetranychus urticae
tetur11g00650
I
0.763