ENSCPOG00000004042 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000004042 T089818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF449
M04560_2.00 		Homo sapiens
NTGYTKGCWCGCGAB
VTCGCGWGCMARCAN		 SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_1 		0.823 0.981
ZNF449
M04561_2.00 		Homo sapiens
RCGCCCAACC
GGTTGGGCGY		 SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_2 		0.823 0.981
ZNF449
M08344_2.00 		Homo sapiens
NNVAGCCCARCCHNNNNNNNN
NNNNNNNNDGGYTGGGCTBNN		 ChIP-seq
Schmitges et al.(2016)
Q6P9G9_1-7.RCADE 		0.823 0.981
ZNF449
M08922_2.00 		Homo sapiens
VAGCCCARCCN
NGGYTGGGCTB		 Misc
Kulakovskiy et al.(2013)
ZN449_HUMAN.H11MO.0.C 		0.823 0.981
ZNF449
M04562_2.00 		Homo sapiens
MMGCCCMACC
GGTKGGGCKK		 SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_1 		0.823 0.981
ZNF449
M04563_2.00 		Homo sapiens
NTGYTKGCDCGCGWB
VWCGCGHGCMARCAN		 SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_2 		0.823 0.981
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000003647 C2H2 ZF 323 345
ENSCPOP00000003647 C2H2 ZF 351 373
ENSCPOP00000003647 C2H2 ZF 379 401
ENSCPOP00000003647 C2H2 ZF 407 429
ENSCPOP00000003647 C2H2 ZF 435 457
ENSCPOP00000003647 C2H2 ZF 463 485
ENSCPOP00000003647 C2H2 ZF 491 513

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000011267 Ailuropoda melanoleuca ENSAMEG00000011267 I 0.823
ENSBTAP00000024080-D1 Bos grunniens ENSBTAP00000024080-D1 I 0.824
ENSCSAG00000007689 Chlorocebus sabaeus ENSCSAG00000007689 I 0.823
ENSEEUG00000003860 Erinaceus europaeus ENSEEUG00000003860 I 0.824
ENSETEG00000009064 Echinops telfairi ENSETEG00000009064 I 0.823
ENSFCAG00000024967 Felis catus ENSFCAG00000024967 I 0.823
ENSLAFG00000017131 Loxodonta africana ENSLAFG00000017131 I 0.814
ENSMPUG00000012654 Mustela putorius furo ENSMPUG00000012654 I 0.823
ENSNLEG00000002174 Nomascus leucogenys ENSNLEG00000002174 I 0.824
ENSOARG00000011892 Ovis aries ENSOARG00000011892 I 0.824
ENSP00000339585 Macaca fascicularis ENSP00000339585 I 0.823
ENSPANG00000012789 Papio anubis ENSPANG00000012789 I 0.823
ENSPPYG00000020749 Pongo abelii ENSPPYG00000020749 I 0.823
ENSSTOG00000024213 Ictidomys tridecemlineatus ENSSTOG00000024213 I 0.823
Myotis_brandtii_ZNF449_10001399 Myotis brandtii Myotis_brandtii_ZNF449_10001399 I 0.824
Zfp449 Rattus norvegicus ENSRNOG00000050562 I 0.816
Zfp449 Mus musculus ENSMUSG00000073176 I 0.817
Zfp449 Dipodomys ordii ENSDORG00000003522 I 0.817
ZNF449 Macaca mulatta ENSMMUG00000008108 I 0.823
ZNF449 Microcebus murinus ENSMICG00000003164 I 0.813
ZNF449 Oryctolagus cuniculus ENSOCUG00000014649 I 0.826
ZNF449 Otolemur garnettii ENSOGAG00000003684 I 0.817
ZNF449 Gorilla gorilla ENSGGOG00000000032 I 0.823
ZNF449 Homo sapiens ENSG00000173275 D 0.823
ZNF449 Pan troglodytes ENSPTRG00000022299 I 0.823
ZNF449 Pteropus vampyrus ENSPVAG00000006757 I 0.824
ZNF449 Equus caballus ENSECAG00000003581 I 0.824
ZNF449 Sus scrofa ENSSSCG00000012691 I 0.824
ZNF449 Tursiops truncatus ENSTTRG00000010555 I 0.824
ZNF449 Vicugna pacos ENSVPAG00000002342 I 0.826
ZNF449 Callithrix jacchus ENSCJAG00000014517 I 0.823
ZNF449 Canis familiaris ENSCAFG00000018905 I 0.823
ZNF449 Bos taurus ENSBTAG00000018090 I 0.824