ENSCSAG00000004278 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000004278 T090272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF23
M04527_2.00 		Homo sapiens
DCRMCCATGGCCGCGHCMN
NKGDCGCGGCCATGGKYGH		 SELEX
Yin et al.(2017)
ZNF23_eDBD_HT-SELEX 		0.826 0.995
ZNF23
M04528_2.00 		Homo sapiens
DCHCCCATGGCCGCKMMCN
NGKKMGCGGCCATGGGDGH		 SELEX
Yin et al.(2017)
ZNF23_eDBD_Methyl-HT-SELEX 		0.826 0.995
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000000630 C2H2 ZF 185 207
ENSCSAP00000000630 C2H2 ZF 213 235
ENSCSAP00000000630 C2H2 ZF 241 263
ENSCSAP00000000630 C2H2 ZF 269 291
ENSCSAP00000000630 C2H2 ZF 297 319
ENSCSAP00000000630 C2H2 ZF 325 347
ENSCSAP00000000630 C2H2 ZF 353 375
ENSCSAP00000000630 C2H2 ZF 381 403
ENSCSAP00000000630 C2H2 ZF 409 431
ENSCSAP00000000630 C2H2 ZF 437 459
ENSCSAP00000000630 C2H2 ZF 465 487
ENSCSAP00000000630 C2H2 ZF 493 515
ENSCSAP00000000630 C2H2 ZF 521 543
ENSCSAP00000000630 C2H2 ZF 549 571
ENSCSAP00000000630 C2H2 ZF 577 599
ENSCSAP00000000630 C2H2 ZF 605 627

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00875 Aquilegia coerulea Aquca_003_00875 N
BGIOSGA025747 Oryza indica BGIOSGA025747 N
BGIOSGA029063 Oryza indica BGIOSGA029063 N
BGIOSGA031062 Oryza indica BGIOSGA031062 N
BGIOSGA037778 Oryza indica BGIOSGA037778 N
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N
Ca_22941 Cicer arietinum Ca_22941 N
Cla000384 Citrullus lanatus Cla000384 N
Cla019597 Citrullus lanatus Cla019597 N
Cucsa.087480 Cucumis sativus Cucsa.087480 N
Cucsa.157080 Cucumis sativus Cucsa.157080 N
Eucgr.G01047 Eucalyptus grandis Eucgr.G01047 N
Eucgr.G01052 Eucalyptus grandis Eucgr.G01052 N
Eucgr.G01053 Eucalyptus grandis Eucgr.G01053 N
Eucgr.H00826 Eucalyptus grandis Eucgr.H00826 N
Eucgr.I02578 Eucalyptus grandis Eucgr.I02578 N
Eucgr.K02205 Eucalyptus grandis Eucgr.K02205 N
F775_31820 Aegilops tauschii F775_31820 N
gene01364-v1.0-hybrid Fragaria vesca gene01364-v1.0-hybrid N
GRMZM2G054252 Zea mays GRMZM2G054252 N
GRMZM2G054277 Zea mays GRMZM2G054277 N
GRMZM2G100583 Zea mays GRMZM2G100583 N
GRMZM2G114850 Zea mays GRMZM2G114850 N
GRMZM2G115721 Zea mays GRMZM2G115721 N
GRMZM2G179049 Zea mays GRMZM2G179049 N
LPERR08G18520 Leersia perrieri LPERR08G18520 N
LPERR09G12100 Leersia perrieri LPERR09G12100 N
LPERR12G15510 Leersia perrieri LPERR12G15510 N
Lus10012927.g Linum usitatissimum Lus10012927.g N
Lus10032004.g Linum usitatissimum Lus10032004.g N
Lus10034999.g Linum usitatissimum Lus10034999.g N
mgf006124m Mimulus guttatus mgf006124m N
mgf019352m Mimulus guttatus mgf019352m N
MLOC_55957 Hordeum vulgare MLOC_55957 N
MLOC_64240 Hordeum vulgare MLOC_64240 N
MLOC_72553 Hordeum vulgare MLOC_72553 N
OB09G22520 Oryza brachyantha OB09G22520 N
OB12G25170 Oryza brachyantha OB12G25170 N
OBART08G21800 Oryza barthii OBART08G21800 N
OBART09G15890 Oryza barthii OBART09G15890 N
OBART12G18490 Oryza barthii OBART12G18490 N
OGLUM07G14740 Oryza glumaepatula OGLUM07G14740 N
OGLUM08G23090 Oryza glumaepatula OGLUM08G23090 N
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N
OLONG_020119 Oryza longistaminata OLONG_020119 N
OMERI06G13840 Oryza meridionalis OMERI06G13840 N
OMERI07G11790 Oryza meridionalis OMERI07G11790 N
OMERI09G11810 Oryza meridionalis OMERI09G11810 N
OMERI12G13180 Oryza meridionalis OMERI12G13180 N
ONIVA07G09980 Oryza nivara ONIVA07G09980 N
ONIVA07G13650 Oryza nivara ONIVA07G13650 N
ONIVA08G24840 Oryza nivara ONIVA08G24840 N
ONIVA09G17010 Oryza nivara ONIVA09G17010 N
ONIVA12G17390 Oryza nivara ONIVA12G17390 N
OPUNC08G19870 Oryza punctata OPUNC08G19870 N
OPUNC09G14320 Oryza punctata OPUNC09G14320 N
OPUNC12G16690 Oryza punctata OPUNC12G16690 N
ORGLA07G0123600 Oryza glaberrima ORGLA07G0123600 N
ORGLA08G0227400 Oryza glaberrima ORGLA08G0227400 N
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N
ORUFI07G15560 Oryza rufipogon ORUFI07G15560 N
ORUFI08G24230 Oryza rufipogon ORUFI08G24230 N
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N
OS08G0535800 Oryza sativa OS08G0535800 N
OS09G0509100 Oryza sativa OS09G0509100 N
OS12G0610600 Oryza sativa OS12G0610600 N
Pavir.Db01277 Panicum virgatum Pavir.Db01277 N
Pavir.Fb00689 Panicum virgatum Pavir.Fb00689 N
Pavir.J04931 Panicum virgatum Pavir.J04931 N
Pavir.J11699 Panicum virgatum Pavir.J11699 N
Pavir.J23083 Panicum virgatum Pavir.J23083 N
Sb02g029460 Sorghum bicolor Sb02g029460 N
Sb03g031000 Sorghum bicolor Sb03g031000 N
Sb10g022130 Sorghum bicolor Sb10g022130 N
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N
Si014408m.g Setaria italica Si014408m.g N
Si022747m.g Setaria italica Si022747m.g N
Si030942m.g Setaria italica Si030942m.g N
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N
TRIUR3_25303 Triticum urartu TRIUR3_25303 N