CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000009125
(
Chlorocebus sabaeus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCSAG00000009125
T090449_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLI4
M08394_2.00
Homo sapiens
TKRNCNTGGCATTCAAGGCYY
RRGCCTTGAATGCCANGNYMA
ChIP-seq
Schmitges et al.(2016)
P10075.MEME
0.824
0.988
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000005374
C2H2 ZF
183
205
HRCESCGKSFKYNSLLLKHQRIH
ENSCSAP00000005374
C2H2 ZF
211
233
YACHECGKRFRGWSGFIQHHRIH
ENSCSAP00000005374
C2H2 ZF
239
261
YECGQCGRAFSHSSHFTQHLRIH
ENSCSAP00000005374
C2H2 ZF
267
289
YKCGECGQAFSQSSNLVRHQRLH
ENSCSAP00000005374
C2H2 ZF
295
317
YACSQCGKAFIWSSVLIEHQRIH
ENSCSAP00000005374
C2H2 ZF
323
345
YECADCGKAFRGRSHFFRHLRTH
ENSCSAP00000005374
C2H2 ZF
351
373
FACGACGKAFGQSSQLIQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Chlorocebus sabaeus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G09170
Brachypodium distachyon
BRADI4G09170
N
0.000
F775_17626
Aegilops tauschii
F775_17626
N
0.000
Traes_4AL_04B7D5758
Triticum aestivum
Traes_4AL_04B7D5758
N
0.000
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.000
Traes_4DS_258687ACC
Triticum aestivum
Traes_4DS_258687ACC
N
0.000
TRIUR3_08698
Triticum urartu
TRIUR3_08698
N
0.000