zbtb18 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000028228 T090874_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.821 0.978
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.821 0.978
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.821 0.978
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.821 0.978
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.821 0.978
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.821 0.978
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.821 0.978
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.821 0.978
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.821 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000141791 C2H2 ZF 385 407
ENSDARP00000141791 C2H2 ZF 426 447
ENSDARP00000141791 C2H2 ZF 453 475
ENSDARP00000141791 C2H2 ZF 481 504

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_03769 Aspergillus nidulans CADANIAG00004949 D 0.000
BBA_06315 Beauveria bassiana BBA_06315 I 0.000
CCM_05742 Cordyceps militaris CCM_05742 I 0.000
FFUJ_12766 Fusarium fujikuroi FFUJ_12766 I 0.000
FGRRES_03226_M Fusarium graminearum FGRRES_03226_M I 0.000
MAJ_08664 Metarhizium majus MAJ_08664 I 0.000
MANI_010873 Metarhizium anisopliae MANI_010873 I 0.000
MBR_08535 Metarhizium brunneum MBR_08535 I 0.000
MGU_08935 Metarhizium guizhouense MGU_08935 I 0.000
PVAR5_5915 Byssochlamys spectabilis PVAR5_5915 I 0.000
S40285_07224 Stachybotrys chlorohalonata S40285_07224 I 0.000
TRIATDRAFT_182375 Trichoderma atroviride TRIATDRAFT_182375 I 0.000
TRIREDRAFT_3605 Trichoderma reesei TRIREDRAFT_3605 I 0.000
TRIVIDRAFT_124610 Trichoderma virens TRIVIDRAFT_124610 I 0.000
X797_010537 Metarhizium robertsii X797_010537 I 0.000