znf281b (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000035910 T090889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp281
M00139_2.00 		Mus musculus
NHDCCCCCHH
DDGGGGGHDN		 PBM
Badis et al.(2009)
Zfp281_0973 		0.801 0.901
ZNF281
M04509_2.00 		Homo sapiens
SCCCCTCCCCCM
KGGGGGAGGGGS		 SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX 		0.801 0.901
ZNF281
M08321_2.00 		Homo sapiens
BNCCCCTCCCCC
GGGGGAGGGGNV		 ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE 		0.801 0.901
Zfp281
M08025_2.00 		Mus musculus
CCCCWCCCCCMVCHB
VDGBKGGGGGWGGGG		 ChIP-seq
Chen et al.(2011)
GSE11329_zfp281 		0.801 0.901
ZNF281
M08906_2.00 		Homo sapiens
BCCCCTCCCCCHNYN
NRNDGGGGGAGGGGV		 Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A 		0.801 0.901
Zfp281
M08999_2.00 		Mus musculus
CCCCTCCCCCMMCBB
VVGKKGGGGGAGGGG		 Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A 		0.801 0.901
ZNF281
M10237_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFP281_01 		0.801 0.901
ZNF281
M04510_2.00 		Homo sapiens
RCCCMTCCCCCR
YGGGGGAKGGGY		 SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX 		0.801 0.901
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000120960 C2H2 ZF 181 203
ENSDARP00000120960 C2H2 ZF 209 231
ENSDARP00000120960 C2H2 ZF 237 259
ENSDARP00000120960 C2H2 ZF 265 286

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m009035 Ricinus communis 30128.m009035 I
30147.m014441 Ricinus communis 30147.m014441 N
ANAC083 Vitis vinifera VIT_01s0146g00280 I
ANAC083 Arabidopsis lyrata scaffold_601328.1 I
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I
Bo2g011120 Brassica oleracea Bo2g011120 I
Bo3g009040 Brassica oleracea Bo3g009040 I
Bo4g181990 Brassica oleracea Bo4g181990 I
Bo9g168950 Brassica oleracea Bo9g168950 I
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I
Bra008849 Brassica rapa Bra008849 I
Bra021856 Brassica rapa Bra021856 I
Bra023395 Brassica rapa Bra023395 I
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I
Carubv10002548m.g Capsella rubella Carubv10002548m.g I
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I
Cla001517 Citrullus lanatus Cla001517 I
Cla011059 Citrullus lanatus Cla011059 I
Cucsa.095210 Cucumis sativus Cucsa.095210 N
Cucsa.349370 Cucumis sativus Cucsa.349370 I
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I
evm.TU.supercontig_4.138 Carica papaya evm.TU.supercontig_4.138 N
GLYMA08G47520 Glycine max GLYMA08G47520 I
GLYMA18G53954 Glycine max GLYMA18G53954 I
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I
GSMUA_Achr10G11910_001 Musa acuminata GSMUA_Achr10G11910_001 N
MDP0000126517 Malus domestica MDP0000126517 I
MDP0000130123 Malus domestica MDP0000130123 I
NAC083 Arabidopsis thaliana AT5G13180 D
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I
PK12461.1 Cannabis sativa PK12461.1 I
Pm007070 Prunus mume Pm007070 I
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I
TCM_008477 Theobroma cacao TCM_008477 I
Thhalv10014495m.g Eutrema salsugineum Thhalv10014495m.g I