im:7142702 (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000067727 T090995_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.823 0.956
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.823 0.956
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.804 0.921
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.804 0.921
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.804 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000088314 C2H2 ZF 368 389
ENSDARP00000088314 C2H2 ZF 395 417
ENSDARP00000088314 C2H2 ZF 696 718
ENSDARP00000088314 C2H2 ZF 724 746
ENSDARP00000088314 C2H2 ZF 754 777

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_143213 Agaricus bisporus AGABI2DRAFT_143213 N
BN946_scf184985.g64 Trametes cinnabarina BN946_scf184985.g64 N
BOTBODRAFT_62341 Botryobasidium botryosum BOTBODRAFT_62341 N
CERSUDRAFT_118233 Ceriporiopsis subvermispora CERSUDRAFT_118233 N
CY34DRAFT_811362 Suillus luteus CY34DRAFT_811362 N
DICSQDRAFT_163481 Dichomitus squalens DICSQDRAFT_163481 N
fgenesh1_pg.C_scaffold_4000408 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000408 N
fgenesh2_pg.C_scaffold_14000115 Heterobasidion annosum fgenesh2_pg.C_scaffold_14000115 N
GALMADRAFT_46548 Galerina marginata GALMADRAFT_46548 N
GLOTRDRAFT_138787 Gloeophyllum trabeum GLOTRDRAFT_138787 N
HETIRDRAFT_431082 Heterobasidion irregulare HETIRDRAFT_431082 N
JAAARDRAFT_196106 Jaapia argillacea JAAARDRAFT_196106 N
K443DRAFT_671746 Laccaria amethystina K443DRAFT_671746 N
LACBIDRAFT_296378 Laccaria bicolor LACBIDRAFT_296378 N
M378DRAFT_70504 Amanita muscaria M378DRAFT_70504 N
M413DRAFT_73437 Hebeloma cylindrosporum M413DRAFT_73437 N
Moror_17790 Moniliophthora roreri Moror_17790 N
PAXINDRAFT_99404 Paxillus involutus PAXINDRAFT_99404 N
PAXRUDRAFT_827663 Paxillus rubicundulus PAXRUDRAFT_827663 N
PHACADRAFT_260024 Phanerochaete carnosa PHACADRAFT_260024 N
PHLGIDRAFT_365607 Phlebiopsis gigantea PHLGIDRAFT_365607 N
PIIN_06096 Piriformospora indica PIIN_06096 N
PILCRDRAFT_820497 Piloderma croceum PILCRDRAFT_820497 N
PISMIDRAFT_102688 Pisolithus microcarpus PISMIDRAFT_102688 N
PLEOSDRAFT_1112913 Pleurotus ostreatus PLEOSDRAFT_1112913 N
SCHCODRAFT_236086 Schizophyllum commune SCHCODRAFT_236086 N
SCLCIDRAFT_1213805 Scleroderma citrinum SCLCIDRAFT_1213805 N
SERLA73DRAFT_159500 Serpula lacrymans SERLA73DRAFT_159500 N