CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
znf1005
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000099917
T091579_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000139396
C2H2 ZF
19
41
LTCTQCGKSLSCKKSLRIHMLIH
ENSDARP00000139396
C2H2 ZF
47
69
FTCAQCGTSFRHTSALNQHMKIH
ENSDARP00000139396
C2H2 ZF
75
97
FTCVQCGTGFRQSSTLNEHMNIH
ENSDARP00000139396
C2H2 ZF
103
125
FTCVQCGKSFRHLSALNKHMLIH
ENSDARP00000139396
C2H2 ZF
131
153
FTCAQCGTSFRRSSHLNQHMLIH
ENSDARP00000139396
C2H2 ZF
159
181
FSCAQCGTSFRQSSALNDHMKIH
ENSDARP00000139396
C2H2 ZF
187
209
FTCVQCGTTFRQSSNLNKHMLIH
ENSDARP00000139396
C2H2 ZF
215
237
HECDQCSKTFLSVSDLKSHLRVH
ENSDARP00000139396
C2H2 ZF
243
265
YSCSLCGKRFKYQQSLKAHQKIH
ENSDARP00000139396
C2H2 ZF
271
293
YVCFACEKTFITAGELKLHQRIH
ENSDARP00000139396
C2H2 ZF
299
321
YACSHCGKTFSLLGTLKTHERIH
ENSDARP00000139396
C2H2 ZF
327
349
YVCSHCDKRFSLLGTLKKHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_chr_4000428
Mycosphaerella graminicola
fgenesh1_pg.C_chr_4000428
N
HCBG_00672
Histoplasma capsulatum
HCBG_00672
N
Mycgr3G92648
Zymoseptoria tritici
Mycgr3G92648
N
PEX1_014990
Penicillium expansum
PEX1_014990
N
UV8b_358
Ustilaginoidea virens
UV8b_358
N