ENSFALG00000013342 (Ficedula albicollis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSFALG00000013342 T094344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.821 0.971
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.821 0.971
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.821 0.971
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.821 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000013921 C2H2 ZF 586 608
ENSFALP00000013921 C2H2 ZF 614 636
ENSFALP00000013921 C2H2 ZF 642 664
ENSFALP00000013921 C2H2 ZF 670 692
ENSFALP00000013921 C2H2 ZF 698 720
ENSFALP00000013921 C2H2 ZF 726 747

Links

Other C2H2 ZF family TFs
Other Ficedula albicollis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PISMIDRAFT_10103 Pisolithus microcarpus PISMIDRAFT_10103 N
PISMIDRAFT_10373 Pisolithus microcarpus PISMIDRAFT_10373 N
PISMIDRAFT_12285 Pisolithus microcarpus PISMIDRAFT_12285 N
PISMIDRAFT_12864 Pisolithus microcarpus PISMIDRAFT_12864 N
PISMIDRAFT_13224 Pisolithus microcarpus PISMIDRAFT_13224 N
PISMIDRAFT_13876 Pisolithus microcarpus PISMIDRAFT_13876 N
PISMIDRAFT_14290 Pisolithus microcarpus PISMIDRAFT_14290 N
PISMIDRAFT_15228 Pisolithus microcarpus PISMIDRAFT_15228 N
PISMIDRAFT_15999 Pisolithus microcarpus PISMIDRAFT_15999 N
PISMIDRAFT_16695 Pisolithus microcarpus PISMIDRAFT_16695 N
PISMIDRAFT_17242 Pisolithus microcarpus PISMIDRAFT_17242 N
PISMIDRAFT_17421 Pisolithus microcarpus PISMIDRAFT_17421 N
PISMIDRAFT_18376 Pisolithus microcarpus PISMIDRAFT_18376 N
PISMIDRAFT_18990 Pisolithus microcarpus PISMIDRAFT_18990 N
PISMIDRAFT_19250 Pisolithus microcarpus PISMIDRAFT_19250 N
PISMIDRAFT_19573 Pisolithus microcarpus PISMIDRAFT_19573 N
PISMIDRAFT_19675 Pisolithus microcarpus PISMIDRAFT_19675 N
PISMIDRAFT_20426 Pisolithus microcarpus PISMIDRAFT_20426 N