CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF250
(
Felis catus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFCAG00000013730
T094513_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.795
0.923
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.795
0.923
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.795
0.923
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.795
0.923
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.795
0.923
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000012735
C2H2 ZF
195
217
YKCTECGKCFGRSSHLLQHQRTH
ENSFCAP00000012735
C2H2 ZF
223
245
YVCGVCGKAFSQSSVLSKHRRIH
ENSFCAP00000012735
C2H2 ZF
251
273
YECNECGKAFRVSSDLAQHHKIH
ENSFCAP00000012735
C2H2 ZF
279
301
HECLECRKSFTQLSHLIQHQRIH
ENSFCAP00000012735
C2H2 ZF
307
329
YVCPLCGKAFNHSTVLRSHQRVH
ENSFCAP00000012735
C2H2 ZF
335
357
HECAQCGRAFSVKRTLLQHQRVH
ENSFCAP00000012735
C2H2 ZF
363
385
YTCSECGRAFSDRSVLIQHHNVH
ENSFCAP00000012735
C2H2 ZF
391
413
YECGECGKAFSHRSTLMNHERIH
ENSFCAP00000012735
C2H2 ZF
419
441
YGCYACGKAFVQHSHLTQHQRVH
ENSFCAP00000012735
C2H2 ZF
447
469
YVCGECGHAFSARRSLVQHERIH
ENSFCAP00000012735
C2H2 ZF
475
497
FRCAQCGKAFSLKATLIVHLRTH
ENSFCAP00000012735
C2H2 ZF
503
525
YECSRCGKAFSQYSVLIQHQRIH
ENSFCAP00000012735
C2H2 ZF
531
553
YECGECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Felis catus
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_03398
Colletotrichum fioriniae
CFIO01_03398
N
FFUJ_01798
Fusarium fujikuroi
FFUJ_01798
N
fgenesh1_pg.sca_8_chr1_1_0000209
Nectria haematococca
fgenesh1_pg.sca_8_chr1_1_0000209
N
FGRRES_20048
Fusarium graminearum
FGRRES_20048
N
NechaG74178
Fusarium solani
NechaG74178
N